Difference between revisions of "RXN-17013"

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(Created page with "Category:reaction == Reaction 3.1.27.9-RXN == * direction: ** left-to-right * common-name: ** trna-splicing endonuclease subunit sen2 * ec-number: ** [http://enzyme.expasy...")
(Created page with "Category:reaction == Reaction RXN-4181-CPD-4101/DIMETHYL-GLYCINE//EPISTEROL/BETAINE.45. == * direction: ** reversible == Reaction formula == * 1.0 CPD-4101[c] '''+'''...")
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[[Category:reaction]]
 
[[Category:reaction]]
== Reaction 3.1.27.9-RXN ==
+
== Reaction RXN-4181-CPD-4101/DIMETHYL-GLYCINE//EPISTEROL/BETAINE.45. ==
 
* direction:
 
* direction:
** left-to-right
+
** reversible
* common-name:
 
** trna-splicing endonuclease subunit sen2
 
* ec-number:
 
** [http://enzyme.expasy.org/EC/4.6.1.16 ec-4.6.1.16]
 
 
== Reaction formula ==
 
== Reaction formula ==
* 1 [[CPD0-2350]][c] '''=>''' 1 [[Pre-tRNA-3-prime-half-molecules]][c] '''+''' 1 [[Pre-tRNA-5-prime-half-molecules]][c] '''+''' 1 [[tRNA-Introns]][c]
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* 1.0 [[CPD-4101]][c] '''+''' 1.0 [[DIMETHYL-GLYCINE]][c] '''<=>''' 1.0 [[BETAINE]][c] '''+''' 1.0 [[EPISTEROL]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
* Gene: [[SJ20336]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
* Gene: [[SJ00058]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
* [[PWY-7803]], tRNA splicing II:
 
** '''1''' reactions found over '''2''' reactions in the full pathway
 
* [[PWY-6689]], tRNA splicing I:
 
** '''2''' reactions found over '''7''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* category: [[gap-filling]]; source: [[gapfilling_solution_with_meneco_draft_medium]]; tool: [[meneco]]; comment: added for gapfilling
 
== External links  ==
 
== External links  ==
* UNIPROT:
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{{#set: direction=reversible}}
** [http://www.uniprot.org/uniprot/O07118 O07118]
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{{#set: nb gene associated=0}}
{{#set: direction=left-to-right}}
+
{{#set: nb pathway associated=0}}
{{#set: common-name=trna-splicing endonuclease subunit sen2}}
+
{{#set: reconstruction category=gap-filling}}
{{#set: ec-number=ec-4.6.1.16}}
+
{{#set: reconstruction tool=meneco}}
{{#set: nb gene associated=2}}
+
{{#set: reconstruction comment=added for gapfilling}}
{{#set: nb pathway associated=2}}
+
{{#set: reconstruction source=gapfilling_solution_with_meneco_draft_medium}}
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction source=saccharina_japonica_genome}}
 

Revision as of 08:34, 15 March 2021

Reaction RXN-4181-CPD-4101/DIMETHYL-GLYCINE//EPISTEROL/BETAINE.45.

  • direction:
    • reversible

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links