Difference between revisions of "RXN-17017"

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(Created page with "Category:reaction == Reaction NARINGENIN-3-DIOXYGENASE-RXN == * direction: ** left-to-right * ec-number: ** [http://enzyme.expasy.org/EC/1.14.11.9 ec-1.14.11.9] * synonymo...")
(Created page with "Category:reaction == Reaction RXN-12645 == * direction: ** reversible * common-name: ** 3-ketodihydrosphinganine (c18) reductase * ec-number: ** [http://enzyme.expasy.org/...")
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction NARINGENIN-3-DIOXYGENASE-RXN ==
+
== Reaction RXN-12645 ==
 
* direction:
 
* direction:
−
** left-to-right
+
** reversible
 +
* common-name:
 +
** 3-ketodihydrosphinganine (c18) reductase
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/1.14.11.9 ec-1.14.11.9]
+
** [http://enzyme.expasy.org/EC/1.1.1.102 ec-1.1.1.102]
−
* synonymous:
 
−
** naringenin,2-oxoglutarate 3-dioxygenase
 
−
** flavonone 3-hydroxylase
 
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[2-KETOGLUTARATE]][c] '''+''' 1 [[NARINGENIN-CMPD]][c] '''+''' 1 [[OXYGEN-MOLECULE]][c] '''=>''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[DIHYDROKAEMPFEROL-CMPD]][c] '''+''' 1 [[SUC]][c]
+
* 1 [[CPD-13613]][c] '''+''' 1 [[NADP]][c] '''<=>''' 1 [[DEHYDROSPHINGANINE]][c] '''+''' 1 [[NADPH]][c] '''+''' 1 [[PROTON]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* Gene: [[SJ12778]]
−
* Gene: [[SJ14675]]
+
** Category: [[annotation]]
−
** Category: [[orthology]]
+
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
* Gene: [[SJ14677]]
 
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
* Gene: [[SJ14672]]
 
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
* Gene: [[SJ08018]]
 
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
* Gene: [[SJ14670]]
 
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
* Gene: [[SJ07557]]
 
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
</div>
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY1F-FLAVSYN]], flavonoid biosynthesis:
 
−
** '''5''' reactions found over '''5''' reactions in the full pathway
 
−
* [[PWY-6787]], flavonoid biosynthesis (in equisetum):
 
−
** '''6''' reactions found over '''10''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
+
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* category: [[orthology]]; source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
−
* LIGAND-RXN:
+
{{#set: direction=reversible}}
−
** [http://www.genome.jp/dbget-bin/www_bget?R02444 R02444]
+
{{#set: common-name=3-ketodihydrosphinganine (c18) reductase}}
−
* UNIPROT:
+
{{#set: ec-number=ec-1.1.1.102}}
−
** [http://www.uniprot.org/uniprot/P28038 P28038]
+
{{#set: nb gene associated=1}}
−
** [http://www.uniprot.org/uniprot/Q07353 Q07353]
+
{{#set: nb pathway associated=0}}
−
** [http://www.uniprot.org/uniprot/Q06942 Q06942]
+
{{#set: reconstruction category=annotation}}
−
** [http://www.uniprot.org/uniprot/Q05964 Q05964]
+
{{#set: reconstruction tool=pathwaytools}}
−
** [http://www.uniprot.org/uniprot/Q05963 Q05963]
 
−
** [http://www.uniprot.org/uniprot/Q05965 Q05965]
 
−
** [http://www.uniprot.org/uniprot/Q43741 Q43741]
 
−
** [http://www.uniprot.org/uniprot/Q42927 Q42927]
 
−
** [http://www.uniprot.org/uniprot/Q40344 Q40344]
 
−
** [http://www.uniprot.org/uniprot/O49047 O49047]
 
−
** [http://www.uniprot.org/uniprot/Q43262 Q43262]
 
−
{{#set: direction=left-to-right}}
 
−
{{#set: ec-number=ec-1.14.11.9}}
 
−
{{#set: synonymous=flavonone 3-hydroxylase|naringenin,2-oxoglutarate 3-dioxygenase}}
 
−
{{#set: nb gene associated=6}}
 
−
{{#set: nb pathway associated=2}}
 
−
{{#set: reconstruction category=orthology}}
 
−
{{#set: reconstruction tool=pantograph}}
 
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=output_pantograph_arabidopsis_thaliana|output_pantograph_ectocarpus_siliculosus}}
+
{{#set: reconstruction source=saccharina_japonica_genome}}

Revision as of 13:15, 14 January 2021

Reaction RXN-12645

  • direction:
    • reversible
  • common-name:
    • 3-ketodihydrosphinganine (c18) reductase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links

Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=RXN-17017&oldid=88524"