Difference between revisions of "RXN-17021"

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(Created page with "Category:reaction == Reaction RXN0-2161 == * direction: ** left-to-right * common-name: ** l-serine:trnasec ligase (amp-forming) * ec-number: ** [http://enzyme.expasy.org/...")
(Created page with "Category:reaction == Reaction ALCDH_LPAREN_nadp_RPAREN_hi == * direction: ** left-to-right * common-name: ** alcohol dehydrogenase (ethanol, nadp), chloroplast == Reaction...")
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[[Category:reaction]]
 
[[Category:reaction]]
== Reaction RXN0-2161 ==
+
== Reaction ALCDH_LPAREN_nadp_RPAREN_hi ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
* common-name:
 
* common-name:
** l-serine:trnasec ligase (amp-forming)
+
** alcohol dehydrogenase (ethanol, nadp), chloroplast
* ec-number:
 
** [http://enzyme.expasy.org/EC/6.1.1.11 ec-6.1.1.11]
 
 
== Reaction formula ==
 
== Reaction formula ==
* 1 [[ATP]][c] '''+''' 1 [[SER]][c] '''+''' 1 [[tRNA-Sec]][c] '''=>''' 1 [[AMP]][c] '''+''' 1 [[L-seryl-SEC-tRNAs]][c] '''+''' 1 [[PPI]][c]
+
* 1.0 [[ACETALD]][h] '''+''' 1.0 [[NADPH]][h] '''+''' 1.0 [[PROTON]][h] '''=>''' 1.0 [[ETOH]][h] '''+''' 1.0 [[NADP]][h]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
* Gene: [[SJ07311]]
+
* Gene: [[SJ05644]]
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
 
** Category: [[orthology]]
 
** Category: [[orthology]]
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
+
*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
* Gene: [[SJ14143]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
** Category: [[orthology]]
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
* [[PWY0-901]], L-selenocysteine biosynthesis I (bacteria):
 
** '''2''' reactions found over '''3''' reactions in the full pathway
 
* [[PWY-6281]], L-selenocysteine biosynthesis II (archaea and eukaryotes):
 
** '''4''' reactions found over '''4''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
+
* category: [[orthology]]; source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
* RHEA:
 
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=42581 42581]
 
* LIGAND-RXN:
 
** [http://www.genome.jp/dbget-bin/www_bget?R08218 R08218]
 
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
{{#set: common-name=l-serine:trnasec ligase (amp-forming)}}
+
{{#set: common-name=alcohol dehydrogenase (ethanol, nadp), chloroplast}}
{{#set: ec-number=ec-6.1.1.11}}
+
{{#set: nb gene associated=1}}
{{#set: nb gene associated=2}}
+
{{#set: nb pathway associated=0}}
{{#set: nb pathway associated=2}}
+
{{#set: reconstruction category=orthology}}
{{#set: reconstruction category=annotation|orthology}}
+
{{#set: reconstruction tool=pantograph}}
{{#set: reconstruction tool=pathwaytools|pantograph}}
 
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
{{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}
+
{{#set: reconstruction source=output_pantograph_nannochloropsis_salina}}

Revision as of 19:04, 14 January 2021

Reaction ALCDH_LPAREN_nadp_RPAREN_hi

  • direction:
    • left-to-right
  • common-name:
    • alcohol dehydrogenase (ethanol, nadp), chloroplast

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links