Difference between revisions of "RXN-171"

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(Created page with "Category:reaction == Reaction ADENPRIBOSYLTRAN-RXN == * direction: ** left-to-right * common-name: ** adenine phosphoribosyltransferase * ec-number: ** [http://enzyme.expa...")
(Created page with "Category:reaction == Reaction RXN-171 == * direction: ** left-to-right * ec-number: ** [http://enzyme.expasy.org/EC/1.14.11 ec-1.14.11] == Reaction formula == * 1 2-KETO...")
 
(One intermediate revision by the same user not shown)
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction ADENPRIBOSYLTRAN-RXN ==
+
== Reaction RXN-171 ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
−
* common-name:
 
−
** adenine phosphoribosyltransferase
 
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/2.4.2.7 ec-2.4.2.7]
+
** [http://enzyme.expasy.org/EC/1.14.11 ec-1.14.11]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[ADENINE]][c] '''+''' 1 [[PRPP]][c] '''=>''' 1 [[AMP]][c] '''+''' 1 [[PPI]][c]
+
* 1 [[2-KETOGLUTARATE]][c] '''+''' 1 [[CPD1F-134]][c] '''+''' 1 [[OXYGEN-MOLECULE]][c] '''=>''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[CPD-482]][c] '''+''' 1 [[SUC]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ15126]]
+
* Gene: [[SJ14670]]
−
** Category: [[annotation]]
+
** Category: [[orthology]]
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
+
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
* Gene: [[SJ14672]]
 
** Category: [[orthology]]
 
** Category: [[orthology]]
 
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
−
* Gene: [[SJ12523]]
+
* Gene: [[SJ07557]]
 
** Category: [[orthology]]
 
** Category: [[orthology]]
 
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
* Gene: [[SJ08018]]
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
* Gene: [[SJ14675]]
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-7807]], glyphosate degradation III:
+
* [[PWY-102]], gibberellin inactivation I (2β-hydroxylation):
−
** '''2''' reactions found over '''7''' reactions in the full pathway
+
** '''4''' reactions found over '''11''' reactions in the full pathway
−
* [[PWY-6610]], adenine salvage:
 
−
** '''2''' reactions found over '''3''' reactions in the full pathway
 
−
* [[PWY-7805]], (aminomethyl)phosphonate degradation:
 
−
** '''2''' reactions found over '''8''' reactions in the full pathway
 
−
* [[PWY-6605]], adenine and adenosine salvage II:
 
−
** '''1''' reactions found over '''2''' reactions in the full pathway
 
−
* [[P121-PWY]], adenine and adenosine salvage I:
 
−
** '''2''' reactions found over '''2''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
 
* category: [[orthology]]; source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
* category: [[orthology]]; source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
== External links  ==
 
== External links  ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* METANETX-RXN : MNXR110157
−
* RHEA:
 
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=16609 16609]
 
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R00190 R00190]
+
** [http://www.genome.jp/dbget-bin/www_bget?R06337 R06337]
−
* UNIPROT:
 
−
** [http://www.uniprot.org/uniprot/P12426 P12426]
 
−
** [http://www.uniprot.org/uniprot/Q9X1A4 Q9X1A4]
 
−
** [http://www.uniprot.org/uniprot/P47202 P47202]
 
−
** [http://www.uniprot.org/uniprot/O34443 O34443]
 
−
** [http://www.uniprot.org/uniprot/O25296 O25296]
 
−
** [http://www.uniprot.org/uniprot/P47518 P47518]
 
−
** [http://www.uniprot.org/uniprot/Q9PP06 Q9PP06]
 
−
** [http://www.uniprot.org/uniprot/P43856 P43856]
 
−
** [http://www.uniprot.org/uniprot/O51718 O51718]
 
−
** [http://www.uniprot.org/uniprot/Q9ZLQ9 Q9ZLQ9]
 
−
** [http://www.uniprot.org/uniprot/P69503 P69503]
 
−
** [http://www.uniprot.org/uniprot/P07741 P07741]
 
−
** [http://www.uniprot.org/uniprot/P08030 P08030]
 
−
** [http://www.uniprot.org/uniprot/P31166 P31166]
 
−
** [http://www.uniprot.org/uniprot/P36973 P36973]
 
−
** [http://www.uniprot.org/uniprot/P52561 P52561]
 
−
** [http://www.uniprot.org/uniprot/Q42563 Q42563]
 
−
** [http://www.uniprot.org/uniprot/Q49639 Q49639]
 
−
** [http://www.uniprot.org/uniprot/P73935 P73935]
 
−
** [http://www.uniprot.org/uniprot/Q9SUW2 Q9SUW2]
 
−
** [http://www.uniprot.org/uniprot/Q43199 Q43199]
 
−
** [http://www.uniprot.org/uniprot/Q9SU38 Q9SU38]
 
−
</div>
 
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: common-name=adenine phosphoribosyltransferase}}
+
{{#set: ec-number=ec-1.14.11}}
−
{{#set: ec-number=ec-2.4.2.7}}
+
{{#set: nb gene associated=5}}
−
{{#set: nb gene associated=2}}
+
{{#set: nb pathway associated=1}}
−
{{#set: nb pathway associated=5}}
+
{{#set: reconstruction category=orthology}}
−
{{#set: reconstruction category=annotation|orthology}}
+
{{#set: reconstruction tool=pantograph}}
−
{{#set: reconstruction tool=pathwaytools|pantograph}}
 
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=output_pantograph_arabidopsis_thaliana|saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}
+
{{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus|output_pantograph_arabidopsis_thaliana}}

Latest revision as of 11:18, 18 March 2021

Reaction RXN-171

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-102, gibberellin inactivation I (2β-hydroxylation):
    • 4 reactions found over 11 reactions in the full pathway

Reconstruction information

External links

  • METANETX-RXN : MNXR110157
  • LIGAND-RXN:





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