Difference between revisions of "RXN-17114"

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(Created page with "Category:reaction == Reaction RXN-171 == * direction: ** left-to-right * ec-number: ** [http://enzyme.expasy.org/EC/1.14.11 ec-1.14.11] == Reaction formula == * 1 2-KETO...")
(Created page with "Category:reaction == Reaction RXN-6201 == * direction: ** left-to-right * common-name: ** 5-hydroxy-2-oxo-4-ureido-2,5-dihydro-1h imidazole-5-carboxylate decarboxylase * e...")
Line 1: Line 1:
 
[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction RXN-171 ==
+
== Reaction RXN-6201 ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 +
* common-name:
 +
** 5-hydroxy-2-oxo-4-ureido-2,5-dihydro-1h imidazole-5-carboxylate decarboxylase
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/1.14.11 ec-1.14.11]
+
** [http://enzyme.expasy.org/EC/4.1.1.97 ec-4.1.1.97]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[2-KETOGLUTARATE]][c] '''+''' 1 [[CPD1F-134]][c] '''+''' 1 [[OXYGEN-MOLECULE]][c] '''=>''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[CPD-482]][c] '''+''' 1 [[SUC]][c]
+
* 1 [[CPD-5821]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[S-ALLANTOIN]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ14670]]
+
* Gene: [[SJ15812]]
−
** Category: [[orthology]]
+
** Category: [[annotation]]
−
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
+
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
* Gene: [[SJ14672]]
 
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
* Gene: [[SJ07557]]
 
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
* Gene: [[SJ08018]]
 
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
* Gene: [[SJ14675]]
 
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-102]], gibberellin inactivation I (2β-hydroxylation):
+
* [[PWY-7849]], urate conversion to allantoin III:
−
** '''4''' reactions found over '''11''' reactions in the full pathway
+
** '''2''' reactions found over '''3''' reactions in the full pathway
 +
* [[PWY-7394]], urate conversion to allantoin II:
 +
** '''2''' reactions found over '''3''' reactions in the full pathway
 +
* [[PWY-5691]], urate conversion to allantoin I:
 +
** '''3''' reactions found over '''3''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[orthology]]; source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
+
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
 +
* RHEA:
 +
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=26302 26302]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R06337 R06337]
+
** [http://www.genome.jp/dbget-bin/www_bget?R06604 R06604]
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: ec-number=ec-1.14.11}}
+
{{#set: common-name=5-hydroxy-2-oxo-4-ureido-2,5-dihydro-1h imidazole-5-carboxylate decarboxylase}}
−
{{#set: nb gene associated=5}}
+
{{#set: ec-number=ec-4.1.1.97}}
−
{{#set: nb pathway associated=1}}
+
{{#set: nb gene associated=1}}
−
{{#set: reconstruction category=orthology}}
+
{{#set: nb pathway associated=3}}
−
{{#set: reconstruction tool=pantograph}}
+
{{#set: reconstruction category=annotation}}
 +
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus|output_pantograph_arabidopsis_thaliana}}
+
{{#set: reconstruction source=saccharina_japonica_genome}}

Revision as of 15:00, 5 January 2021

Reaction RXN-6201

  • direction:
    • left-to-right
  • common-name:
    • 5-hydroxy-2-oxo-4-ureido-2,5-dihydro-1h imidazole-5-carboxylate decarboxylase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-7849, urate conversion to allantoin III:
    • 2 reactions found over 3 reactions in the full pathway
  • PWY-7394, urate conversion to allantoin II:
    • 2 reactions found over 3 reactions in the full pathway
  • PWY-5691, urate conversion to allantoin I:
    • 3 reactions found over 3 reactions in the full pathway

Reconstruction information

External links





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