Difference between revisions of "RXN-17120"

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(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=BENZALDEHYDE-DEHYDROGENASE-NAD+-RXN BENZALDEHYDE-DEHYDROGENASE-NAD+-RXN] == * direction: ** reversi...")
(Created page with "Category:reaction == Reaction RXN-10706 == * direction: ** left-to-right * common-name: ** acyl-coa oxidase ** fatty-acyl coenzyme a oxidase * ec-number: ** [http://enzyme...")
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=BENZALDEHYDE-DEHYDROGENASE-NAD+-RXN BENZALDEHYDE-DEHYDROGENASE-NAD+-RXN] ==
+
== Reaction RXN-10706 ==
 
* direction:
 
* direction:
−
** reversible
+
** left-to-right
 
* common-name:
 
* common-name:
−
** benzaldehyde dehydrogenase (nad+)
+
** acyl-coa oxidase
 +
** fatty-acyl coenzyme a oxidase
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/1.2.1.28 ec-1.2.1.28]
+
** [http://enzyme.expasy.org/EC/1.3.3.6 ec-1.3.3.6]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[BENZALDEHYDE]][c] '''+''' 1 [[NAD]][c] '''+''' 1 [[WATER]][c] '''<=>''' 1 [[BENZOATE]][c] '''+''' 1 [[NADH]][c] '''+''' 2 [[PROTON]][c]
+
* 1 [[CPD-11521]][c] '''+''' 1 [[OXYGEN-MOLECULE]][c] '''=>''' 1 [[CPD-11522]][c] '''+''' 1 [[HYDROGEN-PEROXIDE]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ06456]]
+
* Gene: [[SJ07451]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
* Gene: [[SJ07452]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
−
* Gene: [[SJ06470]]
+
* Gene: [[SJ03090]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
+
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[SJ13468]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
* Gene: [[SJ19669]]
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-6766]], salicin biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6766 PWY-6766]
+
* [[PWY-735]], jasmonic acid biosynthesis:
−
** '''1''' reactions found over '''6''' reactions in the full pathway
+
** '''16''' reactions found over '''19''' reactions in the full pathway
−
* [[PWY-6763]], salicortin biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6763 PWY-6763]
 
−
** '''1''' reactions found over '''11''' reactions in the full pathway
 
−
* [[PWY-6444]], benzoate biosynthesis II (CoA-independent, non-&beta;-oxidative): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6444 PWY-6444]
 
−
** '''1''' reactions found over '''4''' reactions in the full pathway
 
−
* [[TOLUENE-DEG-CATECHOL-PWY]], toluene degradation to benzoate: [http://metacyc.org/META/NEW-IMAGE?object=TOLUENE-DEG-CATECHOL-PWY TOLUENE-DEG-CATECHOL-PWY]
 
−
** '''1''' reactions found over '''3''' reactions in the full pathway
 
−
* [[PWY-1501]], mandelate degradation I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-1501 PWY-1501]
 
−
** '''1''' reactions found over '''5''' reactions in the full pathway
 
−
* [[PWY-6446]], benzoate biosynthesis III (CoA-dependent, non-&beta;-oxidative): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6446 PWY-6446]
 
−
** '''2''' reactions found over '''3''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
== External links  ==
 
== External links  ==
−
* LIGAND-RXN:
+
{{#set: direction=left-to-right}}
−
** [http://www.genome.jp/dbget-bin/www_bget?R01419 R01419]
+
{{#set: common-name=acyl-coa oxidase|fatty-acyl coenzyme a oxidase}}
−
* UNIPROT:
+
{{#set: ec-number=ec-1.3.3.6}}
−
** [http://www.uniprot.org/uniprot/P43503 P43503]
+
{{#set: nb gene associated=5}}
−
{{#set: direction=reversible}}
+
{{#set: nb pathway associated=1}}
−
{{#set: common-name=benzaldehyde dehydrogenase (nad+)}}
+
{{#set: reconstruction category=annotation|orthology}}
−
{{#set: ec-number=ec-1.2.1.28}}
+
{{#set: reconstruction tool=pantograph|pathwaytools}}
−
{{#set: nb gene associated=2}}
 
−
{{#set: nb pathway associated=6}}
 
−
{{#set: reconstruction category=annotation}}
 
−
{{#set: reconstruction tool=pathwaytools}}
 
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=saccharina_japonica_genome}}
+
{{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}

Revision as of 20:38, 18 December 2020

Reaction RXN-10706

  • direction:
    • left-to-right
  • common-name:
    • acyl-coa oxidase
    • fatty-acyl coenzyme a oxidase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-735, jasmonic acid biosynthesis:
    • 16 reactions found over 19 reactions in the full pathway

Reconstruction information

External links

Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=RXN-17120&oldid=48743"