Difference between revisions of "RXN-17131"

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(Created page with "Category:reaction == Reaction RXN-4307 == * direction: ** left-to-right * ec-number: ** [http://enzyme.expasy.org/EC/2.5.1.27 ec-2.5.1.27] == Reaction formula == * 1 AMP...")
(Created page with "Category:reaction == Reaction ARACHIDONATE-5-LIPOXYGENASE-RXN == * direction: ** left-to-right * common-name: ** arachidonate 5-lipoxygenase * synonymous: ** leukotriene-a...")
Line 1: Line 1:
 
[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction RXN-4307 ==
+
== Reaction ARACHIDONATE-5-LIPOXYGENASE-RXN ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
−
* ec-number:
+
* common-name:
−
** [http://enzyme.expasy.org/EC/2.5.1.27 ec-2.5.1.27]
+
** arachidonate 5-lipoxygenase
 +
* synonymous:
 +
** leukotriene-a4 synthase
 +
** arachidonic 5-lipoxygenase
 +
** lta synthase
 +
** leukotriene a4 synthase
 +
** δ5-lipoxygenase
 +
** 5δ-lipoxygenase
 +
** arachidonic acid 5-lipoxygenase
 +
** c-5-lipoxygenase
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[AMP]][c] '''+''' 1 [[CPD-4211]][c] '''=>''' 1 [[CPD-4205]][c] '''+''' 1 [[PPI]][c]
+
* 1 [[ARACHIDONIC_ACID]][c] '''+''' 1 [[OXYGEN-MOLECULE]][c] '''=>''' 1 [[6E8Z11Z14Z-5S-5-HYDROPEROXYCOSA-6]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
 +
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 +
* Gene: [[SJ12567]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[SJ21862]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[SJ08291]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[SJ16634]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[SJ16633]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[SJ05859]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[SJ16632]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[SJ03316]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[SJ08276]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[SJ21859]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[SJ05858]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
</div>
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-2681]], trans-zeatin biosynthesis:
+
* [[PWY66-375]], leukotriene biosynthesis:
−
** '''4''' reactions found over '''11''' reactions in the full pathway
+
** '''5''' reactions found over '''6''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[gap-filling]]; source: [[gapfilling_solution_with_meneco_draft_medium]]; tool: [[meneco]]; comment: added for gapfilling
+
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=15286 15286]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=17486 17486]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R04038 R04038]
+
** [http://www.genome.jp/dbget-bin/www_bget?R01595 R01595]
 +
* UNIPROT:
 +
** [http://www.uniprot.org/uniprot/P12527 P12527]
 +
** [http://www.uniprot.org/uniprot/P09917 P09917]
 +
** [http://www.uniprot.org/uniprot/Q7M0C1 Q7M0C1]
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: ec-number=ec-2.5.1.27}}
+
{{#set: common-name=arachidonate 5-lipoxygenase}}
−
{{#set: nb gene associated=0}}
+
{{#set: synonymous=arachidonic 5-lipoxygenase|leukotriene a4 synthase|leukotriene-a4 synthase|lta synthase|arachidonic acid 5-lipoxygenase|&delta;5-lipoxygenase|c-5-lipoxygenase|5&delta;-lipoxygenase}}
 +
{{#set: nb gene associated=11}}
 
{{#set: nb pathway associated=1}}
 
{{#set: nb pathway associated=1}}
−
{{#set: reconstruction category=gap-filling}}
+
{{#set: reconstruction category=annotation}}
−
{{#set: reconstruction tool=meneco}}
+
{{#set: reconstruction tool=pathwaytools}}
−
{{#set: reconstruction comment=added for gapfilling}}
+
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=gapfilling_solution_with_meneco_draft_medium}}
+
{{#set: reconstruction source=saccharina_japonica_genome}}

Revision as of 19:01, 14 January 2021

Reaction ARACHIDONATE-5-LIPOXYGENASE-RXN

  • direction:
    • left-to-right
  • common-name:
    • arachidonate 5-lipoxygenase
  • synonymous:
    • leukotriene-a4 synthase
    • arachidonic 5-lipoxygenase
    • lta synthase
    • leukotriene a4 synthase
    • δ5-lipoxygenase
    • 5δ-lipoxygenase
    • arachidonic acid 5-lipoxygenase
    • c-5-lipoxygenase

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY66-375, leukotriene biosynthesis:
    • 5 reactions found over 6 reactions in the full pathway

Reconstruction information

External links





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