Difference between revisions of "RXN-1725"

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(Created page with "Category:reaction == Reaction RXN-7953 == * direction: ** left-to-right * common-name: ** [dermatan]-n-acetylgalactosamine 4-sulfate 6-o-sulfotransferase * ec-number: ** [...")
(Created page with "Category:reaction == Reaction POLYNUCLEOTIDE-3-PHOSPHATASE-RXN == * direction: ** left-to-right * ec-number: ** [http://enzyme.expasy.org/EC/3.1.3.32 ec-3.1.3.32] == React...")
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[[Category:reaction]]
 
[[Category:reaction]]
== Reaction RXN-7953 ==
+
== Reaction POLYNUCLEOTIDE-3-PHOSPHATASE-RXN ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
* common-name:
 
** [dermatan]-n-acetylgalactosamine 4-sulfate 6-o-sulfotransferase
 
 
* ec-number:
 
* ec-number:
** [http://enzyme.expasy.org/EC/2.8.2.33 ec-2.8.2.33]
+
** [http://enzyme.expasy.org/EC/3.1.3.32 ec-3.1.3.32]
 
== Reaction formula ==
 
== Reaction formula ==
* 1 [[Dermatan-NAcGal-4-sulfates]][c] '''+''' 1 [[PAPS]][c] '''=>''' 1 [[3-5-ADP]][c] '''+''' 1 [[Dermatan-NAcGal-46-disulfates]][c] '''+''' 1 [[PROTON]][c]
+
* 1 [[3-Phosphopolynucleotides]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[Pi]][c] '''+''' 1 [[Polynucleotide-Holder]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
* Gene: [[SJ21107]]
+
* Gene: [[SJ06572]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
* [[PWY-6568]], dermatan sulfate biosynthesis (late stages):
 
** '''2''' reactions found over '''4''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
 
* LIGAND-RXN:
 
* LIGAND-RXN:
** [http://www.genome.jp/dbget-bin/www_bget?R07288 R07288]
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** [http://www.genome.jp/dbget-bin/www_bget?R02248 R02248]
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
{{#set: common-name=[dermatan]-n-acetylgalactosamine 4-sulfate 6-o-sulfotransferase}}
+
{{#set: ec-number=ec-3.1.3.32}}
{{#set: ec-number=ec-2.8.2.33}}
 
 
{{#set: nb gene associated=1}}
 
{{#set: nb gene associated=1}}
{{#set: nb pathway associated=1}}
+
{{#set: nb pathway associated=0}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction source=saccharina_japonica_genome}}
 
{{#set: reconstruction source=saccharina_japonica_genome}}

Revision as of 19:02, 14 January 2021

Reaction POLYNUCLEOTIDE-3-PHOSPHATASE-RXN

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links