Difference between revisions of "RXN-17252"

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(Created page with "Category:reaction == Reaction RXN66-304 == * direction: ** left-to-right * common-name: ** 14-hydroxylanosterol 14-dehydrogenase ** 4,4-dimethyl-14α-hydroxymethyl-5&...")
(Created page with "Category:reaction == Reaction 3.1.4.14-RXN == * direction: ** left-to-right * ec-number: ** [http://enzyme.expasy.org/EC/3.1.4.14 ec-3.1.4.14] == Reaction formula == * 1 [...")
Line 1: Line 1:
 
[[Category:reaction]]
 
[[Category:reaction]]
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== Reaction RXN66-304 ==
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== Reaction 3.1.4.14-RXN ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
−
* common-name:
+
* ec-number:
−
** 14-hydroxylanosterol 14-dehydrogenase
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** [http://enzyme.expasy.org/EC/3.1.4.14 ec-3.1.4.14]
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** 4,4-dimethyl-14α-hydroxymethyl-5α-cholesta-8,24-dien-3β-o,nadph:oxygen oxidoreductasel
 
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[CPD-4568]][c] '''+''' 1 [[NADPH]][c] '''+''' 1 [[OXYGEN-MOLECULE]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[CPD-4573]][c] '''+''' 1 [[NADP]][c] '''+''' 2 [[WATER]][c]
+
* 1 [[ACP]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[PANTETHEINE-P]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[apo-ACP]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ05072]]
 
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** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
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** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY66-4]], cholesterol biosynthesis III (via desmosterol):
+
* [[PWY-6012]], acyl carrier protein metabolism:
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** '''14''' reactions found over '''4''' reactions in the full pathway
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** '''2''' reactions found over '''2''' reactions in the full pathway
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* [[PWY66-341]], cholesterol biosynthesis I:
 
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** '''14''' reactions found over '''18''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
+
* category: [[gap-filling]]; source: [[gapfilling_solution_with_meneco_draft_medium]]; tool: [[meneco]]; comment: added for gapfilling
−
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
 +
* RHEA:
 +
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=20538 20538]
 +
* LIGAND-RXN:
 +
** [http://www.genome.jp/dbget-bin/www_bget?R01623 R01623]
 +
* UNIPROT:
 +
** [http://www.uniprot.org/uniprot/P43013 P43013]
 +
** [http://www.uniprot.org/uniprot/P41407 P41407]
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: common-name=14-hydroxylanosterol 14-dehydrogenase|4,4-dimethyl-14α-hydroxymethyl-5α-cholesta-8,24-dien-3β-o,nadph:oxygen oxidoreductasel}}
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{{#set: ec-number=ec-3.1.4.14}}
−
{{#set: nb gene associated=1}}
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{{#set: nb gene associated=0}}
−
{{#set: nb pathway associated=2}}
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{{#set: nb pathway associated=1}}
−
{{#set: reconstruction category=annotation|orthology}}
+
{{#set: reconstruction category=gap-filling}}
−
{{#set: reconstruction tool=pathwaytools|pantograph}}
+
{{#set: reconstruction tool=meneco}}
−
{{#set: reconstruction comment=n.a}}
+
{{#set: reconstruction comment=added for gapfilling}}
−
{{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}
+
{{#set: reconstruction source=gapfilling_solution_with_meneco_draft_medium}}

Revision as of 11:21, 15 January 2021

Reaction 3.1.4.14-RXN

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-6012, acyl carrier protein metabolism:
    • 2 reactions found over 2 reactions in the full pathway

Reconstruction information

External links





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