Difference between revisions of "RXN-17252"

From metabolic_network
Jump to navigation Jump to search
(Created page with "Category:reaction == Reaction 3.1.4.14-RXN == * direction: ** left-to-right * ec-number: ** [http://enzyme.expasy.org/EC/3.1.4.14 ec-3.1.4.14] == Reaction formula == * 1 [...")
(Created page with "Category:reaction == Reaction RXN-17878 == * direction: ** left-to-right * common-name: ** methionine aminopeptidase * ec-number: ** [http://enzyme.expasy.org/EC/3.4.11.18...")
Line 1: Line 1:
 
[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction 3.1.4.14-RXN ==
+
== Reaction RXN-17878 ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 +
* common-name:
 +
** methionine aminopeptidase
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/3.1.4.14 ec-3.1.4.14]
+
** [http://enzyme.expasy.org/EC/3.4.11.18 ec-3.4.11.18]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[ACP]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[PANTETHEINE-P]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[apo-ACP]][c]
+
* 1 [[L-methionyl-L-valyl-Protein]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[MET]][c] '''+''' 1 [[N-terminal-L-valine]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
 +
* Gene: [[SJ02903]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[SJ16573]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[SJ16932]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[SJ16939]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[SJ01604]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[SJ18138]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-6012]], acyl carrier protein metabolism:
+
* [[PWY-7800]], Ac/N-end rule pathway:
−
** '''2''' reactions found over '''2''' reactions in the full pathway
+
** '''6''' reactions found over '''21''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[gap-filling]]; source: [[gapfilling_solution_with_meneco_draft_medium]]; tool: [[meneco]]; comment: added for gapfilling
+
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
−
* RHEA:
+
* METANETX-RXN : MNXR121230
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=20538 20538]
 
−
* LIGAND-RXN:
 
−
** [http://www.genome.jp/dbget-bin/www_bget?R01623 R01623]
 
−
* UNIPROT:
 
−
** [http://www.uniprot.org/uniprot/P43013 P43013]
 
−
** [http://www.uniprot.org/uniprot/P41407 P41407]
 
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: ec-number=ec-3.1.4.14}}
+
{{#set: common-name=methionine aminopeptidase}}
−
{{#set: nb gene associated=0}}
+
{{#set: ec-number=ec-3.4.11.18}}
 +
{{#set: nb gene associated=6}}
 
{{#set: nb pathway associated=1}}
 
{{#set: nb pathway associated=1}}
−
{{#set: reconstruction category=gap-filling}}
+
{{#set: reconstruction category=annotation}}
−
{{#set: reconstruction tool=meneco}}
+
{{#set: reconstruction tool=pathwaytools}}
−
{{#set: reconstruction comment=added for gapfilling}}
+
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=gapfilling_solution_with_meneco_draft_medium}}
+
{{#set: reconstruction source=saccharina_japonica_genome}}

Revision as of 08:34, 15 March 2021

Reaction RXN-17878

  • direction:
    • left-to-right
  • common-name:
    • methionine aminopeptidase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-7800, Ac/N-end rule pathway:
    • 6 reactions found over 21 reactions in the full pathway

Reconstruction information

External links

  • METANETX-RXN : MNXR121230





Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=RXN-17252&oldid=127604"