Difference between revisions of "RXN-17274"

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(Created page with "Category:reaction == Reaction RXN-12710 == * direction: ** left-to-right * common-name: ** 3-oxoacyl coa thiolase ** acetyl-coa c-acyltransferase * ec-number: ** [http://e...")
(Created page with "Category:reaction == Reaction SPERMINE-SYNTHASE-RXN == * direction: ** left-to-right * ec-number: ** [http://enzyme.expasy.org/EC/2.5.1.22 ec-2.5.1.22] == Reaction formula...")
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction RXN-12710 ==
+
== Reaction SPERMINE-SYNTHASE-RXN ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
−
* common-name:
 
−
** 3-oxoacyl coa thiolase
 
−
** acetyl-coa c-acyltransferase
 
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/2.3.1.16 ec-2.3.1.16]
+
** [http://enzyme.expasy.org/EC/2.5.1.22 ec-2.5.1.22]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[CO-A]][c] '''+''' 1 [[CPD-13699]][c] '''=>''' 1 [[ACETYL-COA]][c] '''+''' 1 [[CPD-13700]][c]
+
* 1 [[S-ADENOSYLMETHIONINAMINE]][c] '''+''' 1 [[SPERMIDINE]][c] '''=>''' 1 [[5-METHYLTHIOADENOSINE]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[SPERMINE]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ16470]]
+
* Gene: [[SJ19088]]
−
** Category: [[annotation]]
+
** Category: [[orthology]]
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
+
*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
−
* Gene: [[SJ21817]]
+
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
−
** Category: [[annotation]]
+
* Gene: [[SJ05219]]
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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** Category: [[orthology]]
−
* Gene: [[SJ14898]]
+
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
−
* Gene: [[SJ21818]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
* Gene: [[SJ09371]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-6945]], cholesterol degradation to androstenedione I (cholesterol oxidase):
+
* [[ARGSPECAT-PWY]], spermine biosynthesis:
−
** '''5''' reactions found over '''17''' reactions in the full pathway
+
** '''2''' reactions found over '''2''' reactions in the full pathway
−
* [[PWY-6946]], cholesterol degradation to androstenedione II (cholesterol dehydrogenase):
+
* [[POLYAMINSYN3-PWY]], superpathway of polyamine biosynthesis II:
−
** '''6''' reactions found over '''22''' reactions in the full pathway
+
** '''4''' reactions found over '''1''' reactions in the full pathway
−
* [[PWY-6948]], sitosterol degradation to androstenedione:
 
−
** '''2''' reactions found over '''18''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
+
* category: [[orthology]]; source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 +
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
== External links  ==
 
== External links  ==
 +
* RHEA:
 +
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=19974 19974]
 +
* LIGAND-RXN:
 +
** [http://www.genome.jp/dbget-bin/www_bget?R02869 R02869]
 +
* UNIPROT:
 +
** [http://www.uniprot.org/uniprot/P52788 P52788]
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: common-name=3-oxoacyl coa thiolase|acetyl-coa c-acyltransferase}}
+
{{#set: ec-number=ec-2.5.1.22}}
−
{{#set: ec-number=ec-2.3.1.16}}
+
{{#set: nb gene associated=2}}
−
{{#set: nb gene associated=5}}
+
{{#set: nb pathway associated=2}}
−
{{#set: nb pathway associated=3}}
+
{{#set: reconstruction category=orthology}}
−
{{#set: reconstruction category=annotation}}
+
{{#set: reconstruction tool=pantograph}}
−
{{#set: reconstruction tool=pathwaytools}}
 
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=saccharina_japonica_genome}}
+
{{#set: reconstruction source=output_pantograph_nannochloropsis_salina|output_pantograph_ectocarpus_siliculosus}}

Revision as of 13:16, 14 January 2021

Reaction SPERMINE-SYNTHASE-RXN

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • ARGSPECAT-PWY, spermine biosynthesis:
    • 2 reactions found over 2 reactions in the full pathway
  • POLYAMINSYN3-PWY, superpathway of polyamine biosynthesis II:
    • 4 reactions found over 1 reactions in the full pathway

Reconstruction information

External links





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