Difference between revisions of "RXN-17351"

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(Created page with "Category:pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-7948 PWY-7948] == * taxonomic-range: ** [http://metacyc.org/META/NEW-IMAGE?object=tax-33208 tax-3...")
(Created page with "Category:reaction == Reaction BRANCHED-CHAINAMINOTRANSFERILEU-RXN == * direction: ** reversible * common-name: ** isoleucine transaminase * ec-number: ** [http://enzyme.ex...")
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[[Category:pathway]]
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[[Category:reaction]]
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-7948 PWY-7948] ==
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== Reaction BRANCHED-CHAINAMINOTRANSFERILEU-RXN ==
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* taxonomic-range:
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* direction:
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** [http://metacyc.org/META/NEW-IMAGE?object=tax-33208 tax-33208]
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** reversible
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** [http://metacyc.org/META/NEW-IMAGE?object=tax-2 tax-2]
 
 
* common-name:
 
* common-name:
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** levulinate degradation
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** isoleucine transaminase
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== Reaction(s) found ==
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* ec-number:
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* [[RXN-12560]]
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** [http://enzyme.expasy.org/EC/2.6.1.42 ec-2.6.1.42]
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* [[RXN-12561]]
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== Reaction formula ==
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== Reaction(s) not found ==
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* 1 [[2-KETOGLUTARATE]][c] '''+''' 1 [[ILE]][c] '''<=>''' 1 [[2-KETO-3-METHYL-VALERATE]][c] '''+''' 1 [[GLT]][c]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-19192 RXN-19192]
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== Gene(s) associated with this reaction  ==
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-19186 RXN-19186]
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<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-19189 RXN-19189]
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* Gene: [[SJ04586]]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-19187 RXN-19187]
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** Category: [[annotation]]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-19188 RXN-19188]
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-19185 RXN-19185]
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** Category: [[orthology]]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-19190 RXN-19190]
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*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
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{{#set: taxonomic-range=tax-2|tax-33208}}
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*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
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{{#set: common-name=levulinate degradation}}
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* Gene: [[SJ06412]]
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{{#set: nb reaction found=2}}
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** Category: [[annotation]]
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{{#set: completion rate=0.22}}
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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{{#set: nb total reaction=9}}
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** Category: [[orthology]]
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*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
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*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
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*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
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* Gene: [[SJ13018]]
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** Category: [[orthology]]
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*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
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*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
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* Gene: [[SJ17677]]
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** Category: [[orthology]]
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*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
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</div>
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== Pathway(s) ==
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* [[ILEUSYN-PWY]], L-isoleucine biosynthesis I (from threonine):
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** '''4''' reactions found over '''7''' reactions in the full pathway
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* [[ILEUDEG-PWY]], L-isoleucine degradation I:
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** '''5''' reactions found over '''6''' reactions in the full pathway
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* [[PWY-5078]], L-isoleucine degradation II:
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** '''2''' reactions found over '''3''' reactions in the full pathway
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* [[PWY-5103]], L-isoleucine biosynthesis III:
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** '''3''' reactions found over '''7''' reactions in the full pathway
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* [[PWY-5104]], L-isoleucine biosynthesis IV:
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** '''2''' reactions found over '''6''' reactions in the full pathway
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* [[PWY-5101]], L-isoleucine biosynthesis II:
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** '''4''' reactions found over '''8''' reactions in the full pathway
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* [[PWY-5108]], L-isoleucine biosynthesis V:
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** '''2''' reactions found over '''3''' reactions in the full pathway
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== Reconstruction information  ==
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* category: [[orthology]]; source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
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* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
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* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* category: [[orthology]]; source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
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== External links  ==
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* RHEA:
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=24804 24804]
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* LIGAND-RXN:
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** [http://www.genome.jp/dbget-bin/www_bget?R02199 R02199]
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* UNIPROT:
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** [http://www.uniprot.org/uniprot/Q9PIM6 Q9PIM6]
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** [http://www.uniprot.org/uniprot/P38891 P38891]
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** [http://www.uniprot.org/uniprot/P47176 P47176]
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** [http://www.uniprot.org/uniprot/O86505 O86505]
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** [http://www.uniprot.org/uniprot/O14370 O14370]
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** [http://www.uniprot.org/uniprot/O32954 O32954]
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** [http://www.uniprot.org/uniprot/P0AB80 P0AB80]
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{{#set: direction=reversible}}
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{{#set: common-name=isoleucine transaminase}}
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{{#set: ec-number=ec-2.6.1.42}}
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{{#set: nb gene associated=4}}
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{{#set: nb pathway associated=7}}
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{{#set: reconstruction category=annotation|orthology}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}
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{{#set: reconstruction comment=n.a}}
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{{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus|output_pantograph_nannochloropsis_salina|output_pantograph_arabidopsis_thaliana}}

Revision as of 20:43, 18 December 2020

Reaction BRANCHED-CHAINAMINOTRANSFERILEU-RXN

  • direction:
    • reversible
  • common-name:
    • isoleucine transaminase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • ILEUSYN-PWY, L-isoleucine biosynthesis I (from threonine):
    • 4 reactions found over 7 reactions in the full pathway
  • ILEUDEG-PWY, L-isoleucine degradation I:
    • 5 reactions found over 6 reactions in the full pathway
  • PWY-5078, L-isoleucine degradation II:
    • 2 reactions found over 3 reactions in the full pathway
  • PWY-5103, L-isoleucine biosynthesis III:
    • 3 reactions found over 7 reactions in the full pathway
  • PWY-5104, L-isoleucine biosynthesis IV:
    • 2 reactions found over 6 reactions in the full pathway
  • PWY-5101, L-isoleucine biosynthesis II:
    • 4 reactions found over 8 reactions in the full pathway
  • PWY-5108, L-isoleucine biosynthesis V:
    • 2 reactions found over 3 reactions in the full pathway

Reconstruction information

External links





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