Difference between revisions of "RXN-17426"

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(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=GLUCURONATE-REDUCTASE-RXN GLUCURONATE-REDUCTASE-RXN] == * direction: ** left-to-right * common-name...")
 
(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=GLUCOKIN-RXN GLUCOKIN-RXN] == * direction: ** left-to-right * common-name: ** hexokinase ** glucoki...")
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=GLUCURONATE-REDUCTASE-RXN GLUCURONATE-REDUCTASE-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=GLUCOKIN-RXN GLUCOKIN-RXN] ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
* common-name:
 
* common-name:
−
** l-glucuronate reductase
+
** hexokinase
 +
** glucokinase
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/1.1.1.19 ec-1.1.1.19]
+
** [http://enzyme.expasy.org/EC/2.7.1.1 ec-2.7.1.1]
 +
** [http://enzyme.expasy.org/EC/2.7.1.2 ec-2.7.1.2]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[CPD-15530]][c] '''+''' 1 [[NADPH]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[L-GULONATE]][c] '''+''' 1 [[NADP]][c]
+
* 1 [[ATP]][c] '''+''' 1 [[Glucopyranose]][c] '''=>''' 1 [[ADP]][c] '''+''' 1 [[D-glucopyranose-6-phosphate]][c] '''+''' 1 [[PROTON]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ05644]]
+
* Gene: [[SJ04919]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
* Gene: [[SJ12224]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[SJ19906]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-5525]], D-glucuronate degradation I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5525 PWY-5525]
+
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
−
** '''2''' reactions found over '''5''' reactions in the full pathway
+
* [[PWY-2723]], trehalose degradation V: [http://metacyc.org/META/NEW-IMAGE?object=PWY-2723 PWY-2723]
−
* [[PWY3DJ-35471]], L-ascorbate biosynthesis IV: [http://metacyc.org/META/NEW-IMAGE?object=PWY3DJ-35471 PWY3DJ-35471]
+
** '''2''' reactions found over '''3''' reactions in the full pathway
−
** '''3''' reactions found over '''6''' reactions in the full pathway
+
* [[PWY0-1182]], trehalose degradation II (cytosolic): [http://metacyc.org/META/NEW-IMAGE?object=PWY0-1182 PWY0-1182]
 +
** '''2''' reactions found over '''2''' reactions in the full pathway
 +
* [[P122-PWY]], heterolactic fermentation: [http://metacyc.org/META/NEW-IMAGE?object=P122-PWY P122-PWY]
 +
** '''16''' reactions found over '''18''' reactions in the full pathway
 +
* [[PWY-5661]], GDP-glucose biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5661 PWY-5661]
 +
** '''2''' reactions found over '''3''' reactions in the full pathway
 +
* [[GLYCOCAT-PWY]], glycogen degradation I: [http://metacyc.org/META/NEW-IMAGE?object=GLYCOCAT-PWY GLYCOCAT-PWY]
 +
** '''6''' reactions found over '''8''' reactions in the full pathway
 +
* [[PWY-7238]], sucrose biosynthesis II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7238 PWY-7238]
 +
** '''5''' reactions found over '''8''' reactions in the full pathway
 +
* [[P124-PWY]], Bifidobacterium shunt: [http://metacyc.org/META/NEW-IMAGE?object=P124-PWY P124-PWY]
 +
** '''12''' reactions found over '''15''' reactions in the full pathway
 +
* [[GLUCOSE1PMETAB-PWY]], glucose and glucose-1-phosphate degradation: [http://metacyc.org/META/NEW-IMAGE?object=GLUCOSE1PMETAB-PWY GLUCOSE1PMETAB-PWY]
 +
** '''3''' reactions found over '''5''' reactions in the full pathway
 +
* [[PWY-7385]], 1,3-propanediol biosynthesis (engineered): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7385 PWY-7385]
 +
** '''7''' reactions found over '''9''' reactions in the full pathway
 +
* [[PWY-2722]], trehalose degradation IV: [http://metacyc.org/META/NEW-IMAGE?object=PWY-2722 PWY-2722]
 +
** '''1''' reactions found over '''3''' reactions in the full pathway
 +
* [[TREDEGLOW-PWY]], trehalose degradation I (low osmolarity): [http://metacyc.org/META/NEW-IMAGE?object=TREDEGLOW-PWY TREDEGLOW-PWY]
 +
** '''1''' reactions found over '''2''' reactions in the full pathway
 +
* [[PWY-621]], sucrose degradation III (sucrose invertase): [http://metacyc.org/META/NEW-IMAGE?object=PWY-621 PWY-621]
 +
** '''3''' reactions found over '''4''' reactions in the full pathway
 +
* [[ANAGLYCOLYSIS-PWY]], glycolysis III (from glucose): [http://metacyc.org/META/NEW-IMAGE?object=ANAGLYCOLYSIS-PWY ANAGLYCOLYSIS-PWY]
 +
** '''10''' reactions found over '''11''' reactions in the full pathway
 +
* [[PWY-5514]], UDP-N-acetyl-D-galactosamine biosynthesis II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5514 PWY-5514]
 +
** '''5''' reactions found over '''7''' reactions in the full pathway
 +
</div>
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
== External links  ==
 
== External links  ==
 +
* LIGAND-RXN:
 +
** [http://www.genome.jp/dbget-bin/www_bget?R01786 R01786]
 +
** [http://www.genome.jp/dbget-bin/www_bget?R00299 R00299]
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=14911 14911]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=17825 17825]
−
* LIGAND-RXN:
+
* UNIPROT:
−
** [http://www.genome.jp/dbget-bin/www_bget?R01481 R01481]
+
** [http://www.uniprot.org/uniprot/P0A6V8 P0A6V8]
 +
** [http://www.uniprot.org/uniprot/P21908 P21908]
 +
** [http://www.uniprot.org/uniprot/P64254 P64254]
 +
** [http://www.uniprot.org/uniprot/Q8XDH5 Q8XDH5]
 +
** [http://www.uniprot.org/uniprot/Q8XDH4 Q8XDH4]
 +
** [http://www.uniprot.org/uniprot/Q9CE25 Q9CE25]
 +
** [http://www.uniprot.org/uniprot/P52792 P52792]
 +
** [http://www.uniprot.org/uniprot/Q9V2Z6 Q9V2Z6]
 +
** [http://www.uniprot.org/uniprot/Q7M537 Q7M537]
 +
** [http://www.uniprot.org/uniprot/P17709 P17709]
 +
** [http://www.uniprot.org/uniprot/Q04409 Q04409]
 +
** [http://www.uniprot.org/uniprot/Q92407 Q92407]
 +
** [http://www.uniprot.org/uniprot/O31392 O31392]
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: common-name=l-glucuronate reductase}}
+
{{#set: common-name=hexokinase|glucokinase}}
−
{{#set: ec-number=ec-1.1.1.19}}
+
{{#set: ec-number=ec-2.7.1.2|ec-2.7.1.1}}
−
{{#set: nb gene associated=1}}
+
{{#set: nb gene associated=3}}
−
{{#set: nb pathway associated=2}}
+
{{#set: nb pathway associated=14}}
−
{{#set: reconstruction category=annotation}}
+
{{#set: reconstruction category=orthology|annotation}}
−
{{#set: reconstruction tool=pathwaytools}}
+
{{#set: reconstruction tool=pantograph|pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=saccharina_japonica_genome}}
+
{{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}

Revision as of 14:28, 26 August 2019

Reaction GLUCOKIN-RXN

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-2723, trehalose degradation V: PWY-2723
    • 2 reactions found over 3 reactions in the full pathway
  • PWY0-1182, trehalose degradation II (cytosolic): PWY0-1182
    • 2 reactions found over 2 reactions in the full pathway
  • P122-PWY, heterolactic fermentation: P122-PWY
    • 16 reactions found over 18 reactions in the full pathway
  • PWY-5661, GDP-glucose biosynthesis: PWY-5661
    • 2 reactions found over 3 reactions in the full pathway
  • GLYCOCAT-PWY, glycogen degradation I: GLYCOCAT-PWY
    • 6 reactions found over 8 reactions in the full pathway
  • PWY-7238, sucrose biosynthesis II: PWY-7238
    • 5 reactions found over 8 reactions in the full pathway
  • P124-PWY, Bifidobacterium shunt: P124-PWY
    • 12 reactions found over 15 reactions in the full pathway
  • GLUCOSE1PMETAB-PWY, glucose and glucose-1-phosphate degradation: GLUCOSE1PMETAB-PWY
    • 3 reactions found over 5 reactions in the full pathway
  • PWY-7385, 1,3-propanediol biosynthesis (engineered): PWY-7385
    • 7 reactions found over 9 reactions in the full pathway
  • PWY-2722, trehalose degradation IV: PWY-2722
    • 1 reactions found over 3 reactions in the full pathway
  • TREDEGLOW-PWY, trehalose degradation I (low osmolarity): TREDEGLOW-PWY
    • 1 reactions found over 2 reactions in the full pathway
  • PWY-621, sucrose degradation III (sucrose invertase): PWY-621
    • 3 reactions found over 4 reactions in the full pathway
  • ANAGLYCOLYSIS-PWY, glycolysis III (from glucose): ANAGLYCOLYSIS-PWY
    • 10 reactions found over 11 reactions in the full pathway
  • PWY-5514, UDP-N-acetyl-D-galactosamine biosynthesis II: PWY-5514
    • 5 reactions found over 7 reactions in the full pathway

Reconstruction information

External links





Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=RXN-17426&oldid=24470"