Difference between revisions of "RXN-17484"

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(Created page with "Category:reaction == Reaction 2.7.1.148-RXN == * direction: ** left-to-right * common-name: ** 4-diphosphocytidyl-2-c-methylerythritol kinase * ec-number: ** [http://enzym...")
(Created page with "Category:reaction == Reaction RXN-17484 == * direction: ** left-to-right == Reaction formula == * 1 CPD-18889[c] '''+''' 1 NADPH[c] '''+''' 1 PROTON[c] '''=>''...")
 
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[[Category:reaction]]
 
[[Category:reaction]]
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== Reaction 2.7.1.148-RXN ==
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== Reaction RXN-17484 ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
−
* common-name:
 
−
** 4-diphosphocytidyl-2-c-methylerythritol kinase
 
−
* ec-number:
 
−
** [http://enzyme.expasy.org/EC/2.7.1.148 ec-2.7.1.148]
 
 
== Reaction formula ==
 
== Reaction formula ==
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* 1 [[4-CYTIDINE-5-DIPHOSPHO-2-C]][c] '''+''' 1 [[ATP]][c] '''=>''' 1 [[2-PHOSPHO-4-CYTIDINE-5-DIPHOSPHO-2-C-MET]][c] '''+''' 1 [[ADP]][c] '''+''' 1 [[PROTON]][c]
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* 1 [[CPD-18889]][c] '''+''' 1 [[NADPH]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[CPD-18888]][c] '''+''' 1 [[NADP]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ02470]]
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* Gene: [[SJ15264]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
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* [[NONMEVIPP-PWY]], methylerythritol phosphate pathway I:
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* [[PWY-7762]], bacteriochlorophyll b biosynthesis:
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** '''9''' reactions found over '''9''' reactions in the full pathway
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** '''4''' reactions found over '''7''' reactions in the full pathway
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* [[PWY-7560]], methylerythritol phosphate pathway II:
 
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** '''9''' reactions found over '''9''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[orthology]]; source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
−
* category: [[orthology]]; source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
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* METANETX-RXN : MNXR96558
 
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* RHEA:
 
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=18438 18438]
 
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* LIGAND-RXN:
 
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** [http://www.genome.jp/dbget-bin/www_bget?R05634 R05634]
 
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
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{{#set: common-name=4-diphosphocytidyl-2-c-methylerythritol kinase}}
 
−
{{#set: ec-number=ec-2.7.1.148}}
 
 
{{#set: nb gene associated=1}}
 
{{#set: nb gene associated=1}}
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{{#set: nb pathway associated=2}}
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{{#set: nb pathway associated=1}}
−
{{#set: reconstruction category=orthology|annotation}}
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{{#set: reconstruction category=annotation}}
−
{{#set: reconstruction tool=pantograph|pathwaytools}}
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{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=output_pantograph_arabidopsis_thaliana|output_pantograph_nannochloropsis_salina|output_pantograph_ectocarpus_siliculosus|saccharina_japonica_genome}}
+
{{#set: reconstruction source=saccharina_japonica_genome}}

Latest revision as of 11:19, 18 March 2021

Reaction RXN-17484

  • direction:
    • left-to-right

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-7762, bacteriochlorophyll b biosynthesis:
    • 4 reactions found over 7 reactions in the full pathway

Reconstruction information

External links

Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=RXN-17484&oldid=140737"