Difference between revisions of "RXN-17608"

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(Created page with "Category:pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-7953 PWY-7953] == * taxonomic-range: ** [http://metacyc.org/META/NEW-IMAGE?object=tax-2 tax-2] *...")
(Created page with "Category:reaction == Reaction RXN-17608 == * direction: ** left-to-right * common-name: ** amidase * ec-number: ** [http://enzyme.expasy.org/EC/3.5.1.4 ec-3.5.1.4] == Reac...")
 
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[[Category:pathway]]
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[[Category:reaction]]
== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-7953 PWY-7953] ==
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== Reaction RXN-17608 ==
* taxonomic-range:
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* direction:
** [http://metacyc.org/META/NEW-IMAGE?object=tax-2 tax-2]
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** left-to-right
 
* common-name:
 
* common-name:
** udp-n-acetylmuramoyl-pentapeptide biosynthesis iii (meso-diaminopimelate containing)
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** amidase
== Reaction(s) found ==
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* ec-number:
* [[DALADALALIG-RXN]]
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** [http://enzyme.expasy.org/EC/3.5.1.4 ec-3.5.1.4]
* [[UDPNACETYLMURAMATEDEHYDROG-RXN]]
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== Reaction formula ==
== Reaction(s) not found ==
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* 1 [[CPD-19042]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[AMMONIUM]][c] '''+''' 1 [[CPD-19014]][c]
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-19251 RXN-19251]
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== Gene(s) associated with this reaction  ==
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-19252 RXN-19252]
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* Gene: [[SJ16279]]
* [http://metacyc.org/META/NEW-IMAGE?object=UDP-NACMURALGLDAPLIG-RXN UDP-NACMURALGLDAPLIG-RXN]
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** Category: [[annotation]]
* [http://metacyc.org/META/NEW-IMAGE?object=UDPNACETYLGLUCOSAMENOLPYRTRANS-RXN UDPNACETYLGLUCOSAMENOLPYRTRANS-RXN]
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
* [http://metacyc.org/META/NEW-IMAGE?object=UDP-NACMUR-ALA-LIG-RXN UDP-NACMUR-ALA-LIG-RXN]
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* Gene: [[SJ01848]]
* [http://metacyc.org/META/NEW-IMAGE?object=UDP-NACMURALGLDAPAALIG-RXN UDP-NACMURALGLDAPAALIG-RXN]
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** Category: [[annotation]]
{{#set: taxonomic-range=tax-2}}
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
{{#set: common-name=udp-n-acetylmuramoyl-pentapeptide biosynthesis iii (meso-diaminopimelate containing)}}
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** Category: [[orthology]]
{{#set: nb reaction found=2}}
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*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
{{#set: completion rate=0.25}}
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* Gene: [[SJ22527]]
{{#set: nb total reaction=8}}
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** Category: [[annotation]]
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
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* Gene: [[SJ11012]]
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** Category: [[annotation]]
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
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** Category: [[orthology]]
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*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
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== Pathway(s)  ==
 +
== Reconstruction information  ==
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* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
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* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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== External links  ==
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* METANETX-RXN : MNXR121033
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{{#set: direction=left-to-right}}
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{{#set: common-name=amidase}}
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{{#set: ec-number=ec-3.5.1.4}}
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{{#set: nb gene associated=4}}
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{{#set: nb pathway associated=0}}
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{{#set: reconstruction category=orthology|annotation}}
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{{#set: reconstruction tool=pathwaytools|pantograph}}
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{{#set: reconstruction comment=n.a}}
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{{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus|saccharina_japonica_genome}}

Latest revision as of 11:23, 18 March 2021

Reaction RXN-17608

  • direction:
    • left-to-right
  • common-name:
    • amidase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links

  • METANETX-RXN : MNXR121033