Difference between revisions of "RXN-17730"

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(Created page with "Category:reaction == Reaction GLYCINE-AMINOTRANSFERASE-RXN == * direction: ** reversible * common-name: ** glycine transaminase * ec-number: ** [http://enzyme.expasy.org/E...")
(Created page with "Category:reaction == Reaction RXN-17730 == * direction: ** left-to-right * common-name: ** 2-acyl-1-alkyl-sn-glycerol 3-phosphate phosphohydrolase ** phosphatidate phospha...")
 
(6 intermediate revisions by 3 users not shown)
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction GLYCINE-AMINOTRANSFERASE-RXN ==
+
== Reaction RXN-17730 ==
 
* direction:
 
* direction:
−
** reversible
+
** left-to-right
 
* common-name:
 
* common-name:
−
** glycine transaminase
+
** 2-acyl-1-alkyl-sn-glycerol 3-phosphate phosphohydrolase
 +
** phosphatidate phosphatase
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/2.6.1.4 ec-2.6.1.4]
+
** [http://enzyme.expasy.org/EC/3.1.3.4 ec-3.1.3.4]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[2-KETOGLUTARATE]][c] '''+''' 1 [[GLY]][c] '''<=>''' 1 [[GLT]][c] '''+''' 1 [[GLYOX]][c]
+
* 1 [[1-Alkyl-2-acyl-glycerol-3-phosphate]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[1-Alkyl-2-acyl-glycerol]][c] '''+''' 1 [[Pi]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ19809]]
+
* Gene: [[SJ07984]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[SJ13957]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[SJ21389]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[SJ07066]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[SJ21676]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-181]], photorespiration:
+
* [[PWY-7782]], plasmalogen biosynthesis:
−
** '''5''' reactions found over '''9''' reactions in the full pathway
+
** '''11''' reactions found over '''16''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* category: [[orthology]]; source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
−
* RHEA:
+
* METANETX-RXN : MNXR95538
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=14092 14092]
+
{{#set: direction=left-to-right}}
−
* LIGAND-RXN:
+
{{#set: common-name=phosphatidate phosphatase|2-acyl-1-alkyl-sn-glycerol 3-phosphate phosphohydrolase}}
−
** [http://www.genome.jp/dbget-bin/www_bget?R00372 R00372]
+
{{#set: ec-number=ec-3.1.3.4}}
−
{{#set: direction=reversible}}
+
{{#set: nb gene associated=5}}
−
{{#set: common-name=glycine transaminase}}
 
−
{{#set: ec-number=ec-2.6.1.4}}
 
−
{{#set: nb gene associated=1}}
 
 
{{#set: nb pathway associated=1}}
 
{{#set: nb pathway associated=1}}
−
{{#set: reconstruction category=annotation|orthology}}
+
{{#set: reconstruction category=annotation}}
−
{{#set: reconstruction tool=pantograph|pathwaytools}}
+
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_nannochloropsis_salina}}
+
{{#set: reconstruction source=saccharina_japonica_genome}}

Latest revision as of 11:24, 18 March 2021

Reaction RXN-17730

  • direction:
    • left-to-right
  • common-name:
    • 2-acyl-1-alkyl-sn-glycerol 3-phosphate phosphohydrolase
    • phosphatidate phosphatase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-7782, plasmalogen biosynthesis:
    • 11 reactions found over 16 reactions in the full pathway

Reconstruction information

External links

  • METANETX-RXN : MNXR95538





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