Difference between revisions of "RXN-17779"

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(Created page with "Category:reaction == Reaction 2.8.2.23-RXN == * direction: ** left-to-right * common-name: ** [heparan sulfate]-glucosamine 3-sulfotransferase 1 ** [heparan sulfate]-&alph...")
(Created page with "Category:reaction == Reaction RXN-13779 == * direction: ** reversible * common-name: ** scyllo-inositol 2-dehydrogenase (nad+) * ec-number: ** [http://enzyme.expasy.org/EC...")
Line 1: Line 1:
 
[[Category:reaction]]
 
[[Category:reaction]]
== Reaction 2.8.2.23-RXN ==
+
== Reaction RXN-13779 ==
 
* direction:
 
* direction:
** left-to-right
+
** reversible
 
* common-name:
 
* common-name:
** [heparan sulfate]-glucosamine 3-sulfotransferase 1
+
** scyllo-inositol 2-dehydrogenase (nad+)
** [heparan sulfate]-α-d-n-sulfoglucosamine 3-o-sulfotransferase
 
 
* ec-number:
 
* ec-number:
** [http://enzyme.expasy.org/EC/2.8.2.23 ec-2.8.2.23]
+
** [http://enzyme.expasy.org/EC/1.1.1.370 ec-1.1.1.370]
 +
* synonymous:
 +
** iolx
 
== Reaction formula ==
 
== Reaction formula ==
* 1 [[Heparan-sulfate-D-GlcNS]][c] '''+''' 1 [[PAPS]][c] '''=>''' 1 [[3-5-ADP]][c] '''+''' 1 [[Heparan-sulfate-3-N-disulfate]][c] '''+''' 1 [[PROTON]][c]
+
* 1 [[CPD-8050]][c] '''+''' 1 [[NAD]][c] '''<=>''' 1 [[CPD-14808]][c] '''+''' 1 [[NADH]][c] '''+''' 1 [[PROTON]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
* Gene: [[SJ00944]]
+
* Gene: [[SJ20535]]
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
* Gene: [[SJ17721]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
* Gene: [[SJ21424]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
* Gene: [[SJ08012]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
* Gene: [[SJ20108]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
* Gene: [[SJ07694]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
* [[PWY-6558]], heparan sulfate biosynthesis (late stages):
+
* [[PWY-7237]], myo-, chiro- and scyllo-inositol degradation:
** '''7''' reactions found over '''13''' reactions in the full pathway
+
** '''4''' reactions found over '''4''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
 
* RHEA:
 
* RHEA:
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=15462 15462]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=17616 17616]
{{#set: direction=left-to-right}}
+
* LIGAND-RXN:
{{#set: common-name=[heparan sulfate]-&alpha;-d-n-sulfoglucosamine 3-o-sulfotransferase|[heparan sulfate]-glucosamine 3-sulfotransferase 1}}
+
** [http://www.genome.jp/dbget-bin/www_bget?R09953 R09953]
{{#set: ec-number=ec-2.8.2.23}}
+
{{#set: direction=reversible}}
{{#set: nb gene associated=6}}
+
{{#set: common-name=scyllo-inositol 2-dehydrogenase (nad+)}}
 +
{{#set: ec-number=ec-1.1.1.370}}
 +
{{#set: synonymous=iolx}}
 +
{{#set: nb gene associated=1}}
 
{{#set: nb pathway associated=1}}
 
{{#set: nb pathway associated=1}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}

Revision as of 15:01, 5 January 2021

Reaction RXN-13779

  • direction:
    • reversible
  • common-name:
    • scyllo-inositol 2-dehydrogenase (nad+)
  • ec-number:
  • synonymous:
    • iolx

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-7237, myo-, chiro- and scyllo-inositol degradation:
    • 4 reactions found over 4 reactions in the full pathway

Reconstruction information

External links