Difference between revisions of "RXN-17780"

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(Created page with "Category:reaction == Reaction ExchangeSeed-CA+2 == * direction: ** reversible == Reaction formula == * 1.0 CA+2[C-BOUNDARY] '''<=>''' 1.0 CA+2[e] == Gene(s) associ...")
(Created page with "Category:reaction == Reaction ALDOSE-1-EPIMERASE-RXN == * direction: ** reversible * common-name: ** aldose 1-epimerase * ec-number: ** [http://enzyme.expasy.org/EC/5.1.3....")
Line 1: Line 1:
 
[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction ExchangeSeed-CA+2 ==
+
== Reaction ALDOSE-1-EPIMERASE-RXN ==
 
* direction:
 
* direction:
 
** reversible
 
** reversible
 +
* common-name:
 +
** aldose 1-epimerase
 +
* ec-number:
 +
** [http://enzyme.expasy.org/EC/5.1.3.3 ec-5.1.3.3]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1.0 [[CA+2]][C-BOUNDARY] '''<=>''' 1.0 [[CA+2]][e]
+
* 1 [[ALPHA-GLUCOSE]][c] '''<=>''' 1 [[GLC]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
 +
* Gene: [[SJ17177]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
 +
* [[PWY0-1466]], trehalose degradation VI (periplasmic):
 +
** '''2''' reactions found over '''2''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[manual]]; source: [[import_from_medium]]; tool: [[curation]]; comment: added to manage seeds from boundary to extracellular compartment
+
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
* category: [[orthology]]; source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
== External links  ==
 
== External links  ==
 +
* RHEA:
 +
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=10264 10264]
 +
* LIGAND-RXN:
 +
** [http://www.genome.jp/dbget-bin/www_bget?R01602 R01602]
 +
* UNIPROT:
 +
** [http://www.uniprot.org/uniprot/P05149 P05149]
 +
** [http://www.uniprot.org/uniprot/Q8X8E4 Q8X8E4]
 +
** [http://www.uniprot.org/uniprot/P21955 P21955]
 +
** [http://www.uniprot.org/uniprot/P31765 P31765]
 +
** [http://www.uniprot.org/uniprot/Q9CFG9 Q9CFG9]
 +
** [http://www.uniprot.org/uniprot/P0A9C3 P0A9C3]
 +
** [http://www.uniprot.org/uniprot/Q9JSW7 Q9JSW7]
 +
** [http://www.uniprot.org/uniprot/Q9WYB8 Q9WYB8]
 +
** [http://www.uniprot.org/uniprot/Q9CE62 Q9CE62]
 +
** [http://www.uniprot.org/uniprot/Q7M2P6 Q7M2P6]
 +
** [http://www.uniprot.org/uniprot/O48971 O48971]
 
{{#set: direction=reversible}}
 
{{#set: direction=reversible}}
−
{{#set: nb gene associated=0}}
+
{{#set: common-name=aldose 1-epimerase}}
−
{{#set: nb pathway associated=0}}
+
{{#set: ec-number=ec-5.1.3.3}}
−
{{#set: reconstruction category=manual}}
+
{{#set: nb gene associated=1}}
−
{{#set: reconstruction tool=curation}}
+
{{#set: nb pathway associated=1}}
−
{{#set: reconstruction comment=added to manage seeds from boundary to extracellular compartment}}
+
{{#set: reconstruction category=annotation|orthology}}
−
{{#set: reconstruction source=import_from_medium}}
+
{{#set: reconstruction tool=pathwaytools|pantograph}}
 +
{{#set: reconstruction comment=n.a}}
 +
{{#set: reconstruction source=output_pantograph_arabidopsis_thaliana|saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}

Revision as of 13:16, 14 January 2021

Reaction ALDOSE-1-EPIMERASE-RXN

  • direction:
    • reversible
  • common-name:
    • aldose 1-epimerase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY0-1466, trehalose degradation VI (periplasmic):
    • 2 reactions found over 2 reactions in the full pathway

Reconstruction information

External links





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