Difference between revisions of "RXN-17794"

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(Created page with "Category:reaction == Reaction SULFITE-REDUCT-RXN == * direction: ** left-to-right * ec-number: ** [http://enzyme.expasy.org/EC/1.8.1.2 ec-1.8.1.2] == Reaction formula == *...")
(Created page with "Category:reaction == Reaction RXN-17794 == * direction: ** left-to-right * common-name: ** 3-hydroxyacyl-coa dehydrogenase * ec-number: ** [http://enzyme.expasy.org/EC/1.1...")
 
Line 1: Line 1:
 
[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction SULFITE-REDUCT-RXN ==
+
== Reaction RXN-17794 ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 +
* common-name:
 +
** 3-hydroxyacyl-coa dehydrogenase
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/1.8.1.2 ec-1.8.1.2]
+
** [http://enzyme.expasy.org/EC/1.1.1.35 ec-1.1.1.35]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 3 [[NADPH]][c] '''+''' 5 [[PROTON]][c] '''+''' 1 [[SO3]][c] '''=>''' 1 [[HS]][c] '''+''' 3 [[NADP]][c] '''+''' 3 [[WATER]][c]
+
* 1 [[CPD-19154]][c] '''+''' 1 [[NAD]][c] '''=>''' 1 [[CPD-19157]][c] '''+''' 1 [[NADH]][c] '''+''' 1 [[PROTON]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
 +
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 +
* Gene: [[SJ01444]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[SJ16180]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[SJ03584]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[SJ07211]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
* Gene: [[SJ21390]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[SJ16470]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[SJ17348]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[SJ06127]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
</div>
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[SO4ASSIM-PWY]], assimilatory sulfate reduction I:
 
−
** '''3''' reactions found over '''2''' reactions in the full pathway
 
−
* [[PWY-6683]], assimilatory sulfate reduction III:
 
−
** '''3''' reactions found over '''3''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[gap-filling]]; source: [[gapfilling_solution_with_meneco_draft_medium]]; tool: [[meneco]]; comment: added for gapfilling
+
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
== External links  ==
 
== External links  ==
−
* METANETX-RXN : MNXR104650
+
* METANETX-RXN : MNXR121169
−
* RHEA:
 
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=13803 13803]
 
−
* LIGAND-RXN:
 
−
** [http://www.genome.jp/dbget-bin/www_bget?R00858 R00858]
 
−
* UNIPROT:
 
−
** [http://www.uniprot.org/uniprot/P38039 P38039]
 
−
** [http://www.uniprot.org/uniprot/P17845 P17845]
 
−
** [http://www.uniprot.org/uniprot/Q9JUD9 Q9JUD9]
 
−
** [http://www.uniprot.org/uniprot/Q9JUD8 Q9JUD8]
 
−
** [http://www.uniprot.org/uniprot/O32214 O32214]
 
−
** [http://www.uniprot.org/uniprot/P38038 P38038]
 
−
** [http://www.uniprot.org/uniprot/Q59396 Q59396]
 
−
** [http://www.uniprot.org/uniprot/P17846 P17846]
 
−
** [http://www.uniprot.org/uniprot/P52674 P52674]
 
−
** [http://www.uniprot.org/uniprot/P39692 P39692]
 
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: ec-number=ec-1.8.1.2}}
+
{{#set: common-name=3-hydroxyacyl-coa dehydrogenase}}
−
{{#set: nb gene associated=0}}
+
{{#set: ec-number=ec-1.1.1.35}}
−
{{#set: nb pathway associated=2}}
+
{{#set: nb gene associated=8}}
−
{{#set: reconstruction category=gap-filling}}
+
{{#set: nb pathway associated=0}}
−
{{#set: reconstruction tool=meneco}}
+
{{#set: reconstruction category=orthology|annotation}}
−
{{#set: reconstruction comment=added for gapfilling}}
+
{{#set: reconstruction tool=pantograph|pathwaytools}}
−
{{#set: reconstruction source=gapfilling_solution_with_meneco_draft_medium}}
+
{{#set: reconstruction comment=n.a}}
 +
{{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus|saccharina_japonica_genome}}

Latest revision as of 11:20, 18 March 2021

Reaction RXN-17794

  • direction:
    • left-to-right
  • common-name:
    • 3-hydroxyacyl-coa dehydrogenase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links

  • METANETX-RXN : MNXR121169





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