Difference between revisions of "RXN-17796"

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(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-5180 RXN0-5180] == * direction: ** left-to-right * ec-number: ** [http://enzyme.expasy.org/EC/...")
(Created page with "Category:reaction == Reaction RXN-18200 == * direction: ** reversible == Reaction formula == * 1 CPDQT-40[c] '''+''' 1 NAD[c] '''<=>''' 1 CPD-19487[c] '''+'''...")
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[[Category:reaction]]
 
[[Category:reaction]]
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-5180 RXN0-5180] ==
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== Reaction RXN-18200 ==
 
* direction:
 
* direction:
** left-to-right
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** reversible
* ec-number:
 
** [http://enzyme.expasy.org/EC/2.5.1 ec-2.5.1]
 
 
== Reaction formula ==
 
== Reaction formula ==
* 1 [[DELTA3-ISOPENTENYL-PP]][c] '''+''' 1 [[FARNESYL-PP]][c] '''=>''' 1 [[CPD0-1028]][c] '''+''' 1 [[PPI]][c]
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* 1 [[CPDQT-40]][c] '''+''' 1 [[NAD]][c] '''<=>''' 1 [[CPD-19487]][c] '''+''' 1 [[NADH]][c] '''+''' 1 [[PROTON]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
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* Gene: [[SJ21291]]
* Gene: [[SJ10418]]
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** Category: [[annotation]]
** Category: [[orthology]]
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
* Gene: [[SJ03479]]
 
** Category: [[orthology]]
 
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
* Gene: [[SJ18388]]
 
** Category: [[orthology]]
 
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
* Gene: [[SJ04442]]
 
** Category: [[orthology]]
 
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
* Gene: [[SJ10781]]
 
** Category: [[orthology]]
 
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
* Gene: [[SJ19255]]
 
** Category: [[orthology]]
 
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
</div>
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
* [[PWY-5815]], rubber biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5815 PWY-5815]
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* [[PWYQT-4450]], aliphatic glucosinolate biosynthesis, side chain elongation cycle:
** '''1''' reactions found over '''2''' reactions in the full pathway
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** '''5''' reactions found over '''30''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
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* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
* category: [[orthology]]; source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
* RHEA:
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{{#set: direction=reversible}}
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=31282 31282]
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{{#set: nb gene associated=1}}
* LIGAND-RXN:
 
** [http://www.genome.jp/dbget-bin/www_bget?R05555 R05555]
 
{{#set: direction=left-to-right}}
 
{{#set: ec-number=ec-2.5.1}}
 
{{#set: nb gene associated=6}}
 
 
{{#set: nb pathway associated=1}}
 
{{#set: nb pathway associated=1}}
{{#set: reconstruction category=orthology}}
+
{{#set: reconstruction category=annotation}}
{{#set: reconstruction tool=pantograph}}
+
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
{{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus|output_pantograph_arabidopsis_thaliana}}
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{{#set: reconstruction source=saccharina_japonica_genome}}

Revision as of 20:42, 18 December 2020

Reaction RXN-18200

  • direction:
    • reversible

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWYQT-4450, aliphatic glucosinolate biosynthesis, side chain elongation cycle:
    • 5 reactions found over 30 reactions in the full pathway

Reconstruction information

External links