Difference between revisions of "RXN-17798"

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(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-7663 RXN-7663] == * direction: ** left-to-right * common-name: ** chlorophyllide-a:geranyl-gera...")
 
(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-12625 RXN-12625] == * direction: ** left-to-right * common-name: ** n,n'-diacetylchitobiose &be...")
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-7663 RXN-7663] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-12625 RXN-12625] ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
* common-name:
 
* common-name:
−
** chlorophyllide-a:geranyl-geranyl diphosphate geranyl-geranyl transferase
+
** n,n'-diacetylchitobiose β-n-acetylglucosaminidase
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/2.5.1.62 ec-2.5.1.62]
+
** [http://enzyme.expasy.org/EC/3.2.1.52 ec-3.2.1.52]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[CHLOROPHYLLIDE-A]][c] '''+''' 1 [[GERANYLGERANYL-PP]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[CPD-7005]][c] '''+''' 1 [[PPI]][c]
+
* 1 [[CHITOBIOSE]][c] '''+''' 1 [[WATER]][c] '''=>''' 2 [[N-acetyl-D-glucosamine]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ07213]]
+
* Gene: [[SJ10675]]
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
 
** Category: [[orthology]]
 
** Category: [[orthology]]
−
*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
+
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-5064]], chlorophyll a biosynthesis II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5064 PWY-5064]
+
* [[PWY-7822]], chitin degradation III (Serratia): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7822 PWY-7822]
−
** '''5''' reactions found over '''5''' reactions in the full pathway
+
** '''2''' reactions found over '''7''' reactions in the full pathway
 +
* [[PWY-6902]], chitin degradation II (Vibrio): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6902 PWY-6902]
 +
** '''3''' reactions found over '''5''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
+
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
−
* category: [[orthology]]; source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
 +
* LIGAND-RXN:
 +
** [http://www.genome.jp/dbget-bin/www_bget?R00022 R00022]
 +
* RHEA:
 +
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=30674 30674]
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: common-name=chlorophyllide-a:geranyl-geranyl diphosphate geranyl-geranyl transferase}}
+
{{#set: common-name=n,n'-diacetylchitobiose β-n-acetylglucosaminidase}}
−
{{#set: ec-number=ec-2.5.1.62}}
+
{{#set: ec-number=ec-3.2.1.52}}
 
{{#set: nb gene associated=1}}
 
{{#set: nb gene associated=1}}
−
{{#set: nb pathway associated=1}}
+
{{#set: nb pathway associated=2}}
−
{{#set: reconstruction category=orthology|annotation}}
+
{{#set: reconstruction category=orthology}}
−
{{#set: reconstruction tool=pathwaytools|pantograph}}
+
{{#set: reconstruction tool=pantograph}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=output_pantograph_nannochloropsis_salina|saccharina_japonica_genome}}
+
{{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus}}

Revision as of 14:28, 26 August 2019

Reaction RXN-12625

  • direction:
    • left-to-right
  • common-name:
    • n,n'-diacetylchitobiose β-n-acetylglucosaminidase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-7822, chitin degradation III (Serratia): PWY-7822
    • 2 reactions found over 7 reactions in the full pathway
  • PWY-6902, chitin degradation II (Vibrio): PWY-6902
    • 3 reactions found over 5 reactions in the full pathway

Reconstruction information

External links





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