Difference between revisions of "RXN-17830"

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(Created page with "Category:reaction == Reaction CHONDROITIN-4-SULFOTRANSFERASE-RXN == * direction: ** left-to-right * common-name: ** chondroitin 4-sulfotransferase * ec-number: ** [http://...")
(Created page with "Category:reaction == Reaction RXN-17830 == * direction: ** left-to-right * common-name: ** alpha-galactosidase * ec-number: ** [http://enzyme.expasy.org/EC/3.2.1.22 ec-3.2...")
 
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[[Category:reaction]]
 
[[Category:reaction]]
== Reaction CHONDROITIN-4-SULFOTRANSFERASE-RXN ==
+
== Reaction RXN-17830 ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
* common-name:
 
* common-name:
** chondroitin 4-sulfotransferase
+
** alpha-galactosidase
 
* ec-number:
 
* ec-number:
** [http://enzyme.expasy.org/EC/2.8.2.5 ec-2.8.2.5]
+
** [http://enzyme.expasy.org/EC/3.2.1.22 ec-3.2.1.22]
 
== Reaction formula ==
 
== Reaction formula ==
* 1 [[Chondroitin-N-acetyl-galactosamines]][c] '''+''' 1 [[PAPS]][c] '''=>''' 1 [[3-5-ADP]][c] '''+''' 1 [[CHONDROITIN-4-SULFATE]][c] '''+''' 1 [[PROTON]][c]
+
* 1 [[CPD0-2500]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[D-galactopyranose]][c] '''+''' 1 [[P-NITROPHENOL]][c] '''+''' 1 [[PROTON]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
* Gene: [[SJ00043]]
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* Gene: [[SJ02144]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[SJ05258]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
* [[PWY-6567]], chondroitin sulfate biosynthesis (late stages):
 
** '''2''' reactions found over '''5''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
* RHEA:
+
* METANETX-RXN : MNXR121188
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=16102 16102]
 
* LIGAND-RXN:
 
** [http://www.genome.jp/dbget-bin/www_bget?R02180 R02180]
 
* UNIPROT:
 
** [http://www.uniprot.org/uniprot/Q9NPF2 Q9NPF2]
 
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
{{#set: common-name=chondroitin 4-sulfotransferase}}
+
{{#set: common-name=alpha-galactosidase}}
{{#set: ec-number=ec-2.8.2.5}}
+
{{#set: ec-number=ec-3.2.1.22}}
{{#set: nb gene associated=1}}
+
{{#set: nb gene associated=2}}
{{#set: nb pathway associated=1}}
+
{{#set: nb pathway associated=0}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction source=saccharina_japonica_genome}}
 
{{#set: reconstruction source=saccharina_japonica_genome}}

Latest revision as of 11:20, 18 March 2021

Reaction RXN-17830

  • direction:
    • left-to-right
  • common-name:
    • alpha-galactosidase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links

  • METANETX-RXN : MNXR121188