Difference between revisions of "RXN-17830"
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(Created page with "Category:reaction == Reaction RXN-10618 == * direction: ** left-to-right * common-name: ** glucuronosyltransferase * ec-number: ** [http://enzyme.expasy.org/EC/2.4.1.17 ec...") |
(Created page with "Category:reaction == Reaction RXN-9951 == <div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;"> * direction: ** reversible * common-name:...") |
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[[Category:reaction]] | [[Category:reaction]] | ||
− | == Reaction RXN- | + | == Reaction RXN-9951 == |
+ | <div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;"> | ||
* direction: | * direction: | ||
− | ** | + | ** reversible |
* common-name: | * common-name: | ||
− | ** | + | ** isocitrate dehydrogenase (nadp+) |
− | * | + | ** nadp-dependent isocitrate dehydrogenase |
− | ** | + | * synonymous: |
+ | ** idp1 | ||
+ | ** oxalosuccinate decarboxylase | ||
+ | ** oxalsuccinic decarboxylase | ||
+ | ** idp | ||
+ | ** idp2 | ||
+ | ** isocitrate (nicotinamide adenine dinucleotide phosphate) dehydrogenase | ||
+ | ** nadp-linked isocitrate dehydrogenase | ||
+ | ** nadp-specific isocitrate dehydrogenase | ||
+ | ** idh (ambiguous) | ||
+ | ** isocitrate dehydrogenase (nadp-dependent) | ||
+ | ** nadp+-icdh | ||
+ | ** nadp+-linked isocitrate dehydrogenase | ||
+ | ** triphosphopyridine nucleotide-linked isocitrate dehydrogenase-oxalosuccinate carboxylase | ||
+ | ** nadp-dependent isocitric dehydrogenase | ||
+ | ** nadp+-idh | ||
+ | ** isocitrate (nadp) dehydrogenase | ||
+ | ** nadp isocitric dehydrogenase | ||
+ | ** idp3 | ||
+ | ** dual-cofactor-specific isocitrate dehydrogenase | ||
+ | </div> | ||
== Reaction formula == | == Reaction formula == | ||
− | * 1 [[ | + | * 1 [[NADP]][c] '''+''' 1 [[THREO-DS-ISO-CITRATE]][c] '''<=>''' 1 [[NADPH]][c] '''+''' 1 [[OXALO-SUCCINATE]][c] '''+''' 1 [[PROTON]][c] |
== Gene(s) associated with this reaction == | == Gene(s) associated with this reaction == | ||
− | + | * Gene: [[SJ08749]] | |
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− | * Gene: [[ | ||
** Category: [[annotation]] | ** Category: [[annotation]] | ||
− | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: | + | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a |
− | + | ** Category: [[orthology]] | |
− | + | *** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | |
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− | ** Category: [[ | ||
− | *** Source: [[ | ||
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== Pathway(s) == | == Pathway(s) == | ||
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== Reconstruction information == | == Reconstruction information == | ||
+ | * category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | ||
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | * category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
== External links == | == External links == | ||
− | {{#set: direction= | + | * RHEA: |
− | {{#set: common-name= | + | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=25591 25591] |
− | {{#set: | + | * LIGAND-RXN: |
− | {{#set: nb gene associated= | + | ** [http://www.genome.jp/dbget-bin/www_bget?R01899 R01899] |
− | {{#set: nb pathway associated= | + | {{#set: direction=reversible}} |
− | {{#set: reconstruction category=annotation}} | + | {{#set: common-name=isocitrate dehydrogenase (nadp+)|nadp-dependent isocitrate dehydrogenase}} |
− | {{#set: reconstruction tool=pathwaytools}} | + | {{#set: synonymous=nadp-linked isocitrate dehydrogenase|nadp-dependent isocitric dehydrogenase|idp2|oxalosuccinate decarboxylase|nadp+-idh|idh (ambiguous)|oxalsuccinic decarboxylase|isocitrate (nadp) dehydrogenase|idp3|isocitrate (nicotinamide adenine dinucleotide phosphate) dehydrogenase|nadp-specific isocitrate dehydrogenase|idp|nadp isocitric dehydrogenase|idp1|nadp+-linked isocitrate dehydrogenase|triphosphopyridine nucleotide-linked isocitrate dehydrogenase-oxalosuccinate carboxylase|nadp+-icdh|isocitrate dehydrogenase (nadp-dependent)|dual-cofactor-specific isocitrate dehydrogenase}} |
+ | {{#set: nb gene associated=1}} | ||
+ | {{#set: nb pathway associated=0}} | ||
+ | {{#set: reconstruction category=annotation|orthology}} | ||
+ | {{#set: reconstruction tool=pathwaytools|pantograph}} | ||
{{#set: reconstruction comment=n.a}} | {{#set: reconstruction comment=n.a}} | ||
− | {{#set: reconstruction source=saccharina_japonica_genome}} | + | {{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}} |
Revision as of 15:33, 5 January 2021
Contents
Reaction RXN-9951
- direction:
- reversible
- common-name:
- isocitrate dehydrogenase (nadp+)
- nadp-dependent isocitrate dehydrogenase
- synonymous:
- idp1
- oxalosuccinate decarboxylase
- oxalsuccinic decarboxylase
- idp
- idp2
- isocitrate (nicotinamide adenine dinucleotide phosphate) dehydrogenase
- nadp-linked isocitrate dehydrogenase
- nadp-specific isocitrate dehydrogenase
- idh (ambiguous)
- isocitrate dehydrogenase (nadp-dependent)
- nadp+-icdh
- nadp+-linked isocitrate dehydrogenase
- triphosphopyridine nucleotide-linked isocitrate dehydrogenase-oxalosuccinate carboxylase
- nadp-dependent isocitric dehydrogenase
- nadp+-idh
- isocitrate (nadp) dehydrogenase
- nadp isocitric dehydrogenase
- idp3
- dual-cofactor-specific isocitrate dehydrogenase
Reaction formula
- 1 NADP[c] + 1 THREO-DS-ISO-CITRATE[c] <=> 1 NADPH[c] + 1 OXALO-SUCCINATE[c] + 1 PROTON[c]
Gene(s) associated with this reaction
- Gene: SJ08749
- Category: annotation
- Source: saccharina_japonica_genome, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: orthology
- Source: output_pantograph_ectocarpus_siliculosus, Tool: pantograph, Assignment: n.a, Comment: n.a
- Category: annotation
Pathway(s)
Reconstruction information
- category: orthology; source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
- category: annotation; source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
External links