Difference between revisions of "RXN-17873"
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(Created page with "Category:pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=DARABITOLUTIL-PWY DARABITOLUTIL-PWY] == * taxonomic-range: ** [http://metacyc.org/META/NEW-IMAGE?obje...") |
(Created page with "Category:reaction == Reaction H2PTERIDINEPYROPHOSPHOKIN-RXN == * direction: ** left-to-right * common-name: ** 6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase * ec-num...") |
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− | [[Category: | + | [[Category:reaction]] |
− | == | + | == Reaction H2PTERIDINEPYROPHOSPHOKIN-RXN == |
− | * | + | * direction: |
− | ** | + | ** left-to-right |
* common-name: | * common-name: | ||
− | ** | + | ** 6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase |
− | == Reaction(s) | + | * ec-number: |
− | * [[ | + | ** [http://enzyme.expasy.org/EC/2.7.6.3 ec-2.7.6.3] |
− | == | + | == Reaction formula == |
− | * [http:// | + | * 1 [[AMINO-OH-HYDROXYMETHYL-DIHYDROPTERIDINE]][c] '''+''' 1 [[ATP]][c] '''=>''' 1 [[AMP]][c] '''+''' 1 [[DIHYDROPTERIN-CH2OH-PP]][c] '''+''' 1 [[PROTON]][c] |
− | {{#set: | + | == Gene(s) associated with this reaction == |
− | {{#set: | + | * Gene: [[SJ22398]] |
− | {{#set: nb | + | ** Category: [[annotation]] |
− | {{#set: | + | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a |
− | {{#set: | + | ** Category: [[orthology]] |
+ | *** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | ||
+ | *** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | ||
+ | == Pathway(s) == | ||
+ | * [[PWY-6797]], 6-hydroxymethyl-dihydropterin diphosphate biosynthesis II (Methanocaldococcus): | ||
+ | ** '''3''' reactions found over '''7''' reactions in the full pathway | ||
+ | * [[PWY-7853]], 6-hydroxymethyl-dihydropterin diphosphate biosynthesis V (Pyrococcus): | ||
+ | ** '''1''' reactions found over '''4''' reactions in the full pathway | ||
+ | * [[PWY-7852]], 6-hydroxymethyl-dihydropterin diphosphate biosynthesis IV (Plasmodium): | ||
+ | ** '''2''' reactions found over '''3''' reactions in the full pathway | ||
+ | * [[PWY-7539]], 6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia): | ||
+ | ** '''4''' reactions found over '''5''' reactions in the full pathway | ||
+ | * [[PWY-6147]], 6-hydroxymethyl-dihydropterin diphosphate biosynthesis I: | ||
+ | ** '''5''' reactions found over '''5''' reactions in the full pathway | ||
+ | == Reconstruction information == | ||
+ | * category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
+ | * category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | ||
+ | * category: [[orthology]]; source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a | ||
+ | == External links == | ||
+ | <div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;"> | ||
+ | * RHEA: | ||
+ | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=11413 11413] | ||
+ | * LIGAND-RXN: | ||
+ | ** [http://www.genome.jp/dbget-bin/www_bget?R03503 R03503] | ||
+ | * UNIPROT: | ||
+ | ** [http://www.uniprot.org/uniprot/P22291 P22291] | ||
+ | ** [http://www.uniprot.org/uniprot/P26281 P26281] | ||
+ | ** [http://www.uniprot.org/uniprot/O84619 O84619] | ||
+ | ** [http://www.uniprot.org/uniprot/Q9ZM35 Q9ZM35] | ||
+ | ** [http://www.uniprot.org/uniprot/Q9RXY4 Q9RXY4] | ||
+ | ** [http://www.uniprot.org/uniprot/O66550 O66550] | ||
+ | ** [http://www.uniprot.org/uniprot/O25680 O25680] | ||
+ | ** [http://www.uniprot.org/uniprot/Q9PJ54 Q9PJ54] | ||
+ | ** [http://www.uniprot.org/uniprot/Q9JV81 Q9JV81] | ||
+ | ** [http://www.uniprot.org/uniprot/P64143 P64143] | ||
+ | ** [http://www.uniprot.org/uniprot/Q9Z7E8 Q9Z7E8] | ||
+ | ** [http://www.uniprot.org/uniprot/P82602 P82602] | ||
+ | ** [http://www.uniprot.org/uniprot/P29252 P29252] | ||
+ | ** [http://www.uniprot.org/uniprot/P72736 P72736] | ||
+ | ** [http://www.uniprot.org/uniprot/O04862 O04862] | ||
+ | ** [http://www.uniprot.org/uniprot/Q9SZV3 Q9SZV3] | ||
+ | ** [http://www.uniprot.org/uniprot/Q9X8I1 Q9X8I1] | ||
+ | </div> | ||
+ | {{#set: direction=left-to-right}} | ||
+ | {{#set: common-name=6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase}} | ||
+ | {{#set: ec-number=ec-2.7.6.3}} | ||
+ | {{#set: nb gene associated=1}} | ||
+ | {{#set: nb pathway associated=5}} | ||
+ | {{#set: reconstruction category=annotation|orthology}} | ||
+ | {{#set: reconstruction tool=pantograph|pathwaytools}} | ||
+ | {{#set: reconstruction comment=n.a}} | ||
+ | {{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus|output_pantograph_arabidopsis_thaliana}} |
Revision as of 20:45, 18 December 2020
Contents
Reaction H2PTERIDINEPYROPHOSPHOKIN-RXN
- direction:
- left-to-right
- common-name:
- 6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase
- ec-number:
Reaction formula
- 1 AMINO-OH-HYDROXYMETHYL-DIHYDROPTERIDINE[c] + 1 ATP[c] => 1 AMP[c] + 1 DIHYDROPTERIN-CH2OH-PP[c] + 1 PROTON[c]
Gene(s) associated with this reaction
- Gene: SJ22398
- Category: annotation
- Source: saccharina_japonica_genome, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: orthology
- Source: output_pantograph_arabidopsis_thaliana, Tool: pantograph, Assignment: n.a, Comment: n.a
- Source: output_pantograph_ectocarpus_siliculosus, Tool: pantograph, Assignment: n.a, Comment: n.a
- Category: annotation
Pathway(s)
- PWY-6797, 6-hydroxymethyl-dihydropterin diphosphate biosynthesis II (Methanocaldococcus):
- 3 reactions found over 7 reactions in the full pathway
- PWY-7853, 6-hydroxymethyl-dihydropterin diphosphate biosynthesis V (Pyrococcus):
- 1 reactions found over 4 reactions in the full pathway
- PWY-7852, 6-hydroxymethyl-dihydropterin diphosphate biosynthesis IV (Plasmodium):
- 2 reactions found over 3 reactions in the full pathway
- PWY-7539, 6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia):
- 4 reactions found over 5 reactions in the full pathway
- PWY-6147, 6-hydroxymethyl-dihydropterin diphosphate biosynthesis I:
- 5 reactions found over 5 reactions in the full pathway
Reconstruction information
- category: annotation; source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- category: orthology; source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
- category: orthology; source: output_pantograph_arabidopsis_thaliana; tool: pantograph; comment: n.a
External links