Difference between revisions of "RXN-17876"

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(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=1-PHOSPHATIDYLINOSITOL-3-KINASE-RXN 1-PHOSPHATIDYLINOSITOL-3-KINASE-RXN] == * direction: ** left-to...")
(Created page with "Category:reaction == Reaction TransportSeed-MG+2 == * direction: ** left-to-right == Reaction formula == * 1.0 MG+2[e] '''=>''' 1.0 MG+2[c] == Gene(s) associated w...")
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[[Category:reaction]]
 
[[Category:reaction]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=1-PHOSPHATIDYLINOSITOL-3-KINASE-RXN 1-PHOSPHATIDYLINOSITOL-3-KINASE-RXN] ==
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== Reaction TransportSeed-MG+2 ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
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* common-name:
 
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** phosphatidylinositol 3-kinase
 
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** 1-phosphatidylinositol-3-kinase
 
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* ec-number:
 
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** [http://enzyme.expasy.org/EC/2.7.1.137 ec-2.7.1.137]
 
 
== Reaction formula ==
 
== Reaction formula ==
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* 1 [[ATP]][c] '''+''' 1 [[L-1-phosphatidyl-inositols]][c] '''=>''' 1 [[ADP]][c] '''+''' 1 [[CPD-177]][c] '''+''' 1 [[PROTON]][c]
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* 1.0 [[MG+2]][e] '''=>''' 1.0 [[MG+2]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
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* Gene: [[SJ10785]]
 
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** Category: [[orthology]]
 
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*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
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* Gene: [[SJ02006]]
 
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** Category: [[annotation]]
 
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
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* Gene: [[SJ17148]]
 
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** Category: [[annotation]]
 
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
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** Category: [[orthology]]
 
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*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
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* Gene: [[SJ12193]]
 
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** Category: [[annotation]]
 
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
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* [[PWY-6352]], 3-phosphoinositide biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6352 PWY-6352]
 
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** '''5''' reactions found over '''8''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
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* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
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* category: [[manual]]; source: [[import_from_medium]]; tool: [[curation]]; comment: added to manage seeds from extracellular to cytosol compartment
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* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
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<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 
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* RHEA:
 
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=12710 12710]
 
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* LIGAND-RXN:
 
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** [http://www.genome.jp/dbget-bin/www_bget?R03362 R03362]
 
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* UNIPROT:
 
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** [http://www.uniprot.org/uniprot/P22543 P22543]
 
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** [http://www.uniprot.org/uniprot/Q13315 Q13315]
 
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** [http://www.uniprot.org/uniprot/P32871 P32871]
 
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** [http://www.uniprot.org/uniprot/P42338 P42338]
 
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** [http://www.uniprot.org/uniprot/P42336 P42336]
 
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** [http://www.uniprot.org/uniprot/P32600 P32600]
 
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** [http://www.uniprot.org/uniprot/P35169 P35169]
 
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** [http://www.uniprot.org/uniprot/O04269 O04269]
 
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** [http://www.uniprot.org/uniprot/P91634 P91634]
 
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** [http://www.uniprot.org/uniprot/Q92213 Q92213]
 
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** [http://www.uniprot.org/uniprot/P54673 P54673]
 
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** [http://www.uniprot.org/uniprot/P54674 P54674]
 
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** [http://www.uniprot.org/uniprot/P54675 P54675]
 
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** [http://www.uniprot.org/uniprot/P54677 P54677]
 
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** [http://www.uniprot.org/uniprot/O35904 O35904]
 
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** [http://www.uniprot.org/uniprot/P50520 P50520]
 
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</div>
 
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
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{{#set: common-name=phosphatidylinositol 3-kinase|1-phosphatidylinositol-3-kinase}}
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{{#set: nb gene associated=0}}
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{{#set: ec-number=ec-2.7.1.137}}
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{{#set: nb pathway associated=0}}
−
{{#set: nb gene associated=4}}
+
{{#set: reconstruction category=manual}}
−
{{#set: nb pathway associated=1}}
+
{{#set: reconstruction tool=curation}}
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{{#set: reconstruction category=annotation|orthology}}
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{{#set: reconstruction comment=added to manage seeds from extracellular to cytosol compartment}}
−
{{#set: reconstruction tool=pantograph|pathwaytools}}
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{{#set: reconstruction source=import_from_medium}}
−
{{#set: reconstruction comment=n.a}}
 
−
{{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus|saccharina_japonica_genome}}
 

Revision as of 20:38, 18 December 2020

Reaction TransportSeed-MG+2

  • direction:
    • left-to-right

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links

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