Difference between revisions of "RXN-17893"

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(Created page with "Category:reaction == Reaction AIRS-RXN == * direction: ** left-to-right * common-name: ** phosphoribosylformylglycinamide cyclo-ligase * ec-number: ** [http://enzyme.expas...")
(Created page with "Category:reaction == Reaction ExchangeSeed-FE+3 == * direction: ** reversible == Reaction formula == * 1.0 FE+3[C-BOUNDARY] '''<=>''' 1.0 FE+3[e] == Gene(s) associ...")
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[[Category:reaction]]
 
[[Category:reaction]]
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== Reaction AIRS-RXN ==
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== Reaction ExchangeSeed-FE+3 ==
 
* direction:
 
* direction:
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** left-to-right
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** reversible
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* common-name:
 
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** phosphoribosylformylglycinamide cyclo-ligase
 
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* ec-number:
 
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** [http://enzyme.expasy.org/EC/6.3.3.1 ec-6.3.3.1]
 
 
== Reaction formula ==
 
== Reaction formula ==
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* 1 [[5-PHOSPHORIBOSYL-N-FORMYLGLYCINEAMIDINE]][c] '''+''' 1 [[ATP]][c] '''=>''' 1 [[5-PHOSPHORIBOSYL-5-AMINOIMIDAZOLE]][c] '''+''' 1 [[ADP]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[Pi]][c]
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* 1.0 [[FE+3]][C-BOUNDARY] '''<=>''' 1.0 [[FE+3]][e]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
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* Gene: [[SJ06408]]
 
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** Category: [[annotation]]
 
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
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* [[PWY-6277]], superpathway of 5-aminoimidazole ribonucleotide biosynthesis:
 
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** '''6''' reactions found over '''5''' reactions in the full pathway
 
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* [[PWY-6121]], 5-aminoimidazole ribonucleotide biosynthesis I:
 
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** '''5''' reactions found over '''5''' reactions in the full pathway
 
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* [[PWY-6122]], 5-aminoimidazole ribonucleotide biosynthesis II:
 
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** '''4''' reactions found over '''5''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
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* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* category: [[manual]]; source: [[import_from_medium]]; tool: [[curation]]; comment: added to manage seeds from boundary to extracellular compartment
 
== External links  ==
 
== External links  ==
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<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
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{{#set: direction=reversible}}
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* RHEA:
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{{#set: nb gene associated=0}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=23033 23033]
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{{#set: nb pathway associated=0}}
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* LIGAND-RXN:
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{{#set: reconstruction category=manual}}
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** [http://www.genome.jp/dbget-bin/www_bget?R04208 R04208]
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{{#set: reconstruction tool=curation}}
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* UNIPROT:
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{{#set: reconstruction comment=added to manage seeds from boundary to extracellular compartment}}
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** [http://www.uniprot.org/uniprot/P07244 P07244]
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{{#set: reconstruction source=import_from_medium}}
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** [http://www.uniprot.org/uniprot/P12043 P12043]
 
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** [http://www.uniprot.org/uniprot/P21872 P21872]
 
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** [http://www.uniprot.org/uniprot/P08178 P08178]
 
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** [http://www.uniprot.org/uniprot/P00967 P00967]
 
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** [http://www.uniprot.org/uniprot/P16340 P16340]
 
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** [http://www.uniprot.org/uniprot/P22102 P22102]
 
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** [http://www.uniprot.org/uniprot/Q57656 Q57656]
 
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** [http://www.uniprot.org/uniprot/O66968 O66968]
 
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** [http://www.uniprot.org/uniprot/Q9JUA2 Q9JUA2]
 
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** [http://www.uniprot.org/uniprot/P43848 P43848]
 
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** [http://www.uniprot.org/uniprot/Q9PME0 Q9PME0]
 
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** [http://www.uniprot.org/uniprot/Q64737 Q64737]
 
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** [http://www.uniprot.org/uniprot/P20772 P20772]
 
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** [http://www.uniprot.org/uniprot/Q55422 Q55422]
 
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** [http://www.uniprot.org/uniprot/P52424 P52424]
 
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</div>
 
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{{#set: direction=left-to-right}}
 
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{{#set: common-name=phosphoribosylformylglycinamide cyclo-ligase}}
 
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{{#set: ec-number=ec-6.3.3.1}}
 
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{{#set: nb gene associated=1}}
 
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{{#set: nb pathway associated=3}}
 
−
{{#set: reconstruction category=annotation}}
 
−
{{#set: reconstruction tool=pathwaytools}}
 
−
{{#set: reconstruction comment=n.a}}
 
−
{{#set: reconstruction source=saccharina_japonica_genome}}
 

Revision as of 13:13, 14 January 2021

Reaction ExchangeSeed-FE+3

  • direction:
    • reversible

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links

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