Difference between revisions of "RXN-17918"

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(Created page with "Category:reaction == Reaction RXN-13202 == * direction: ** left-to-right * common-name: ** ammonia-dependent carbamoyl-phosphate synthase * ec-number: ** [http://enzyme.ex...")
(Created page with "Category:reaction == Reaction RXN-13431 == * direction: ** left-to-right * ec-number: ** [http://enzyme.expasy.org/EC/2.3.1 ec-2.3.1] == Reaction formula == * 1 ACETYL-C...")
Line 1: Line 1:
 
[[Category:reaction]]
 
[[Category:reaction]]
== Reaction RXN-13202 ==
+
== Reaction RXN-13431 ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
* common-name:
 
** ammonia-dependent carbamoyl-phosphate synthase
 
 
* ec-number:
 
* ec-number:
** [http://enzyme.expasy.org/EC/6.3.4.16 ec-6.3.4.16]
+
** [http://enzyme.expasy.org/EC/2.3.1 ec-2.3.1]
 
== Reaction formula ==
 
== Reaction formula ==
* 1 [[AMMONIUM]][c] '''+''' 2 [[ATP]][c] '''+''' 1 [[HCO3]][c] '''=>''' 2 [[ADP]][c] '''+''' 1 [[CARBAMOYL-P]][c] '''+''' 2 [[PROTON]][c] '''+''' 1 [[Pi]][c]
+
* 1 [[ACETYL-COA]][c] '''+''' 9 [[MALONYL-COA]][c] '''+''' 13 [[NADPH]][c] '''+''' 21 [[PROTON]][c] '''=>''' 1 [[5Z8Z11Z14Z17Z-EICOSAPENTAENOATE]][c] '''+''' 9 [[CARBON-DIOXIDE]][c] '''+''' 10 [[CO-A]][c] '''+''' 13 [[NADP]][c] '''+''' 8 [[WATER]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
* Gene: [[SJ17851]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
** Category: [[orthology]]
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
* Gene: [[SJ15949]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
* [[PWY-4984]], urea cycle:
+
* [[PWY-7050]], icosapentaenoate biosynthesis IV (bacteria):
** '''5''' reactions found over '''5''' reactions in the full pathway
+
** '''1''' reactions found over '''1''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
+
* category: [[manual]]; source: [[previous_meneco]]; tool: [[curation]]; comment: reaction added with meneco (previous version)
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
* UNIPROT:
 
** [http://www.uniprot.org/uniprot/O15829 O15829]
 
** [http://www.uniprot.org/uniprot/O15830 O15830]
 
** [http://www.uniprot.org/uniprot/P07756 P07756]
 
** [http://www.uniprot.org/uniprot/P31327 P31327]
 
* LIGAND-RXN:
 
** [http://www.genome.jp/dbget-bin/www_bget?R00149 R00149]
 
* RHEA:
 
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=18030 18030]
 
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
{{#set: common-name=ammonia-dependent carbamoyl-phosphate synthase}}
+
{{#set: ec-number=ec-2.3.1}}
{{#set: ec-number=ec-6.3.4.16}}
+
{{#set: nb gene associated=0}}
{{#set: nb gene associated=2}}
 
 
{{#set: nb pathway associated=1}}
 
{{#set: nb pathway associated=1}}
{{#set: reconstruction category=annotation|orthology}}
+
{{#set: reconstruction category=manual}}
{{#set: reconstruction tool=pathwaytools|pantograph}}
+
{{#set: reconstruction tool=curation}}
{{#set: reconstruction comment=n.a}}
+
{{#set: reconstruction comment=reaction added with meneco (previous version)}}
{{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}
+
{{#set: reconstruction source=previous_meneco}}

Revision as of 19:06, 14 January 2021

Reaction RXN-13431

  • direction:
    • left-to-right
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-7050, icosapentaenoate biosynthesis IV (bacteria):
    • 1 reactions found over 1 reactions in the full pathway

Reconstruction information

External links