Difference between revisions of "RXN-17918"

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(Created page with "Category:reaction == Reaction RXN-13431 == * direction: ** left-to-right * ec-number: ** [http://enzyme.expasy.org/EC/2.3.1 ec-2.3.1] == Reaction formula == * 1 ACETYL-C...")
(Created page with "Category:reaction == Reaction RXN-17918 == * direction: ** left-to-right * common-name: ** dna ligase (atp) == Reaction formula == * 1 5-Phospho-terminated-DNAs[c] '''...")
 
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[[Category:reaction]]
 
[[Category:reaction]]
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== Reaction RXN-13431 ==
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== Reaction RXN-17918 ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
−
* ec-number:
+
* common-name:
−
** [http://enzyme.expasy.org/EC/2.3.1 ec-2.3.1]
+
** dna ligase (atp)
 
== Reaction formula ==
 
== Reaction formula ==
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* 1 [[ACETYL-COA]][c] '''+''' 9 [[MALONYL-COA]][c] '''+''' 13 [[NADPH]][c] '''+''' 21 [[PROTON]][c] '''=>''' 1 [[5Z8Z11Z14Z17Z-EICOSAPENTAENOATE]][c] '''+''' 9 [[CARBON-DIOXIDE]][c] '''+''' 10 [[CO-A]][c] '''+''' 13 [[NADP]][c] '''+''' 8 [[WATER]][c]
+
* 1 [[5-Phospho-terminated-DNAs]][c] '''+''' 1 [[DNA-Ligase-L-lysine-adenylate]][c] '''+''' 2 [[PROTON]][c] '''=>''' 1 [[A-5-prime-PP-5-prime-DNA]][c] '''+''' 1 [[DNA-Ligase-L-lysine]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
 +
* Gene: [[SJ19344]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[SJ16080]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[SJ15543]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[SJ13521]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-7050]], icosapentaenoate biosynthesis IV (bacteria):
 
−
** '''1''' reactions found over '''1''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[manual]]; source: [[previous_meneco]]; tool: [[curation]]; comment: reaction added with meneco (previous version)
+
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
 +
* METANETX-RXN : MNXR121262
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: ec-number=ec-2.3.1}}
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{{#set: common-name=dna ligase (atp)}}
−
{{#set: nb gene associated=0}}
+
{{#set: nb gene associated=4}}
−
{{#set: nb pathway associated=1}}
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{{#set: nb pathway associated=0}}
−
{{#set: reconstruction category=manual}}
+
{{#set: reconstruction category=annotation}}
−
{{#set: reconstruction tool=curation}}
+
{{#set: reconstruction tool=pathwaytools}}
−
{{#set: reconstruction comment=reaction added with meneco (previous version)}}
+
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=previous_meneco}}
+
{{#set: reconstruction source=saccharina_japonica_genome}}

Latest revision as of 11:24, 18 March 2021

Reaction RXN-17918

  • direction:
    • left-to-right
  • common-name:
    • dna ligase (atp)

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links

  • METANETX-RXN : MNXR121262





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