Difference between revisions of "RXN-17919"

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(Created page with "Category:reaction == Reaction PRAISOM-RXN == * direction: ** left-to-right * common-name: ** phosphoribosylanthranilate isomerase * ec-number: ** [http://enzyme.expasy.org...")
(Created page with "Category:reaction == Reaction ALANINE-AMINOTRANSFERASE-RXN == * direction: ** reversible * common-name: ** glutamate-pyruvate aminotransferase * ec-number: ** [http://enzy...")
Line 1: Line 1:
 
[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction PRAISOM-RXN ==
+
== Reaction ALANINE-AMINOTRANSFERASE-RXN ==
 
* direction:
 
* direction:
−
** left-to-right
+
** reversible
 
* common-name:
 
* common-name:
−
** phosphoribosylanthranilate isomerase
+
** glutamate-pyruvate aminotransferase
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/5.3.1.24 ec-5.3.1.24]
+
** [http://enzyme.expasy.org/EC/2.6.1.2 ec-2.6.1.2]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[N-5-PHOSPHORIBOSYL-ANTHRANILATE]][c] '''=>''' 1 [[CARBOXYPHENYLAMINO-DEOXYRIBULOSE-P]][c]
+
* 1 [[2-KETOGLUTARATE]][c] '''+''' 1 [[L-ALPHA-ALANINE]][c] '''<=>''' 1 [[GLT]][c] '''+''' 1 [[PYRUVATE]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ17722]]
+
* Gene: [[SJ06815]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
+
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
* Gene: [[SJ01083]]
+
* Gene: [[SJ19809]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
** Category: [[orthology]]
 
** Category: [[orthology]]
−
*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
+
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[TRPSYN-PWY]], L-tryptophan biosynthesis:
+
* [[ALANINE-SYN2-PWY]], L-alanine biosynthesis II:
−
** '''6''' reactions found over '''6''' reactions in the full pathway
+
** '''1''' reactions found over '''1''' reactions in the full pathway
 +
* [[ALANINE-DEG3-PWY]], L-alanine degradation III:
 +
** '''1''' reactions found over '''1''' reactions in the full pathway
 +
* [[ALACAT2-PWY]], L-alanine degradation II (to D-lactate):
 +
** '''3''' reactions found over '''3''' reactions in the full pathway
 +
* [[PWY-7117]], C4 photosynthetic carbon assimilation cycle, PEPCK type:
 +
** '''10''' reactions found over '''12''' reactions in the full pathway
 +
* [[PWY-7115]], C4 photosynthetic carbon assimilation cycle, NAD-ME type:
 +
** '''9''' reactions found over '''10''' reactions in the full pathway
 +
* [[PWY-7383]], anaerobic energy metabolism (invertebrates, cytosol):
 +
** '''4''' reactions found over '''7''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 +
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
−
* category: [[orthology]]; source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
+
* category: [[orthology]]; source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
−
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=21541 21541]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=19456 19456]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R03509 R03509]
+
** [http://www.genome.jp/dbget-bin/www_bget?R00258 R00258]
 
* UNIPROT:
 
* UNIPROT:
−
** [http://www.uniprot.org/uniprot/P16923 P16923]
+
** [http://www.uniprot.org/uniprot/P13191 P13191]
−
** [http://www.uniprot.org/uniprot/O67853 O67853]
+
** [http://www.uniprot.org/uniprot/P25409 P25409]
−
** [http://www.uniprot.org/uniprot/P12289 P12289]
+
** [http://www.uniprot.org/uniprot/P24298 P24298]
−
** [http://www.uniprot.org/uniprot/P42393 P42393]
+
** [http://www.uniprot.org/uniprot/Q9UR81 Q9UR81]
−
** [http://www.uniprot.org/uniprot/Q9PIF3 Q9PIF3]
+
** [http://www.uniprot.org/uniprot/P34106 P34106]
−
** [http://www.uniprot.org/uniprot/Q57893 Q57893]
+
** [http://www.uniprot.org/uniprot/P52894 P52894]
−
** [http://www.uniprot.org/uniprot/P20167 P20167]
+
** [http://www.uniprot.org/uniprot/Q42685 Q42685]
−
** [http://www.uniprot.org/uniprot/Q9JVD1 Q9JVD1]
+
{{#set: direction=reversible}}
−
** [http://www.uniprot.org/uniprot/P00910 P00910]
+
{{#set: common-name=glutamate-pyruvate aminotransferase}}
−
** [http://www.uniprot.org/uniprot/P00909 P00909]
+
{{#set: ec-number=ec-2.6.1.2}}
−
** [http://www.uniprot.org/uniprot/P00912 P00912]
 
−
** [http://www.uniprot.org/uniprot/P13997 P13997]
 
−
** [http://www.uniprot.org/uniprot/P50857 P50857]
 
−
** [http://www.uniprot.org/uniprot/P27710 P27710]
 
−
** [http://www.uniprot.org/uniprot/P17218 P17218]
 
−
** [http://www.uniprot.org/uniprot/P00908 P00908]
 
−
** [http://www.uniprot.org/uniprot/P18483 P18483]
 
−
** [http://www.uniprot.org/uniprot/Q02002 Q02002]
 
−
** [http://www.uniprot.org/uniprot/Q56320 Q56320]
 
−
** [http://www.uniprot.org/uniprot/Q01128 Q01128]
 
−
** [http://www.uniprot.org/uniprot/P74435 P74435]
 
−
** [http://www.uniprot.org/uniprot/Q9YGB1 Q9YGB1]
 
−
</div>
 
−
{{#set: direction=left-to-right}}
 
−
{{#set: common-name=phosphoribosylanthranilate isomerase}}
 
−
{{#set: ec-number=ec-5.3.1.24}}
 
 
{{#set: nb gene associated=2}}
 
{{#set: nb gene associated=2}}
−
{{#set: nb pathway associated=1}}
+
{{#set: nb pathway associated=6}}
 
{{#set: reconstruction category=annotation|orthology}}
 
{{#set: reconstruction category=annotation|orthology}}
 
{{#set: reconstruction tool=pathwaytools|pantograph}}
 
{{#set: reconstruction tool=pathwaytools|pantograph}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=output_pantograph_nannochloropsis_salina|saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}
+
{{#set: reconstruction source=output_pantograph_arabidopsis_thaliana|saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}

Revision as of 19:00, 14 January 2021

Reaction ALANINE-AMINOTRANSFERASE-RXN

  • direction:
    • reversible
  • common-name:
    • glutamate-pyruvate aminotransferase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • ALANINE-SYN2-PWY, L-alanine biosynthesis II:
    • 1 reactions found over 1 reactions in the full pathway
  • ALANINE-DEG3-PWY, L-alanine degradation III:
    • 1 reactions found over 1 reactions in the full pathway
  • ALACAT2-PWY, L-alanine degradation II (to D-lactate):
    • 3 reactions found over 3 reactions in the full pathway
  • PWY-7117, C4 photosynthetic carbon assimilation cycle, PEPCK type:
    • 10 reactions found over 12 reactions in the full pathway
  • PWY-7115, C4 photosynthetic carbon assimilation cycle, NAD-ME type:
    • 9 reactions found over 10 reactions in the full pathway
  • PWY-7383, anaerobic energy metabolism (invertebrates, cytosol):
    • 4 reactions found over 7 reactions in the full pathway

Reconstruction information

External links





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