Difference between revisions of "RXN-17924"

From metabolic_network
Jump to navigation Jump to search
(Created page with "Category:reaction == Reaction METHYLTHIOADENOSINE-NUCLEOSIDASE-RXN == * direction: ** left-to-right * common-name: ** 5'-methylthioadenosine nucleosidase * ec-number: ** [...")
(Created page with "Category:reaction == Reaction GLUCONOLACT-RXN == * direction: ** left-to-right * common-name: ** gluconolactonase * ec-number: ** [http://enzyme.expasy.org/EC/3.1.1.17 ec-...")
Line 1: Line 1:
 
[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction METHYLTHIOADENOSINE-NUCLEOSIDASE-RXN ==
+
== Reaction GLUCONOLACT-RXN ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
* common-name:
 
* common-name:
−
** 5'-methylthioadenosine nucleosidase
+
** gluconolactonase
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/3.2.2.16 ec-3.2.2.16]
+
** [http://enzyme.expasy.org/EC/3.1.1.17 ec-3.1.1.17]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[5-METHYLTHIOADENOSINE]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[ADENINE]][c] '''+''' 1 [[CPD-560]][c]
+
* 1 [[GLC-D-LACTONE]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[GLUCONATE]][c] '''+''' 1 [[PROTON]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ14933]]
+
* Gene: [[SJ05433]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
** Category: [[orthology]]
+
* Gene: [[SJ19511]]
−
*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
+
** Category: [[annotation]]
−
* Gene: [[SJ02916]]
+
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[SJ05432]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-6754]], S-methyl-5'-thioadenosine degradation I:
+
* [[GLUCOSE1PMETAB-PWY]], glucose and glucose-1-phosphate degradation:
−
** '''1''' reactions found over '''2''' reactions in the full pathway
+
** '''3''' reactions found over '''5''' reactions in the full pathway
−
* [[PWY0-1391]], S-methyl-5'-thioadenosine degradation IV:
+
* [[DHGLUCONATE-PYR-CAT-PWY]], glucose degradation (oxidative):
−
** '''1''' reactions found over '''1''' reactions in the full pathway
+
** '''1''' reactions found over '''5''' reactions in the full pathway
 +
* [[PWY-2221]], Entner-Doudoroff pathway III (semi-phosphorylative):
 +
** '''6''' reactions found over '''9''' reactions in the full pathway
 +
* [[NPGLUCAT-PWY]], Entner-Doudoroff pathway II (non-phosphorylative):
 +
** '''4''' reactions found over '''9''' reactions in the full pathway
 +
* [[PWY-5530]], sorbitol biosynthesis II:
 +
** '''2''' reactions found over '''3''' reactions in the full pathway
 +
* [[PWY-7165]], L-ascorbate biosynthesis VIII (engineered pathway):
 +
** '''1''' reactions found over '''7''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[orthology]]; source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
 +
* METANETX-RXN : MNXR107037
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=13618 13618]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=10441 10441]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R01401 R01401]
+
** [http://www.genome.jp/dbget-bin/www_bget?R01519 R01519]
 +
* UNIPROT:
 +
** [http://www.uniprot.org/uniprot/Q01578 Q01578]
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: common-name=5'-methylthioadenosine nucleosidase}}
+
{{#set: common-name=gluconolactonase}}
−
{{#set: ec-number=ec-3.2.2.16}}
+
{{#set: ec-number=ec-3.1.1.17}}
−
{{#set: nb gene associated=2}}
+
{{#set: nb gene associated=3}}
−
{{#set: nb pathway associated=2}}
+
{{#set: nb pathway associated=6}}
−
{{#set: reconstruction category=annotation|orthology}}
+
{{#set: reconstruction category=annotation}}
−
{{#set: reconstruction tool=pathwaytools|pantograph}}
+
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=output_pantograph_nannochloropsis_salina|saccharina_japonica_genome}}
+
{{#set: reconstruction source=saccharina_japonica_genome}}

Revision as of 08:34, 15 March 2021

Reaction GLUCONOLACT-RXN

  • direction:
    • left-to-right
  • common-name:
    • gluconolactonase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • GLUCOSE1PMETAB-PWY, glucose and glucose-1-phosphate degradation:
    • 3 reactions found over 5 reactions in the full pathway
  • DHGLUCONATE-PYR-CAT-PWY, glucose degradation (oxidative):
    • 1 reactions found over 5 reactions in the full pathway
  • PWY-2221, Entner-Doudoroff pathway III (semi-phosphorylative):
    • 6 reactions found over 9 reactions in the full pathway
  • NPGLUCAT-PWY, Entner-Doudoroff pathway II (non-phosphorylative):
    • 4 reactions found over 9 reactions in the full pathway
  • PWY-5530, sorbitol biosynthesis II:
    • 2 reactions found over 3 reactions in the full pathway
  • PWY-7165, L-ascorbate biosynthesis VIII (engineered pathway):
    • 1 reactions found over 7 reactions in the full pathway

Reconstruction information

External links





Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=RXN-17924&oldid=127989"