Difference between revisions of "RXN-17924"

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(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=GLUTRNAREDUCT-RXN GLUTRNAREDUCT-RXN] == * direction: ** left-to-right * common-name: ** glutamyl-tr...")
 
(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN66-318 RXN66-318] == * direction: ** left-to-right * common-name: ** 4α-carboxy-5α-c...")
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=GLUTRNAREDUCT-RXN GLUTRNAREDUCT-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN66-318 RXN66-318] ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
* common-name:
 
* common-name:
−
** glutamyl-trna reductase
+
** 4α-carboxy-5α-cholesta-8,24-dien-3β-ol:nad(p)+ 3-dehydrogenase (decarboxylating)
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/1.2.1.70 ec-1.2.1.70]
+
** [http://enzyme.expasy.org/EC/1.1.1.170 ec-1.1.1.170]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[Charged-GLT-tRNAs]][c] '''+''' 1 [[NADPH]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[GLT-tRNAs]][c] '''+''' 1 [[GLUTAMATE-1-SEMIALDEHYDE]][c] '''+''' 1 [[NADP]][c]
+
* 1 [[CPD-4702]][c] '''+''' 1 [[NAD-P-OR-NOP]][c] '''=>''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[CPD-4581]][c] '''+''' 1 [[NADH-P-OR-NOP]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ03601]]
+
* Gene: [[SJ04782]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-5188]], tetrapyrrole biosynthesis I (from glutamate): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5188 PWY-5188]
+
* [[PWY-6074]], zymosterol biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6074 PWY-6074]
−
** '''6''' reactions found over '''6''' reactions in the full pathway
+
** '''6''' reactions found over '''14''' reactions in the full pathway
 +
* [[PWY66-4]], cholesterol biosynthesis III (via desmosterol): [http://metacyc.org/META/NEW-IMAGE?object=PWY66-4 PWY66-4]
 +
** '''14''' reactions found over '''4''' reactions in the full pathway
 +
* [[PWY66-341]], cholesterol biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=PWY66-341 PWY66-341]
 +
** '''14''' reactions found over '''18''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
−
* RHEA:
 
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=12346 12346]
 
−
* LIGAND-RXN:
 
−
** [http://www.genome.jp/dbget-bin/www_bget?R04109 R04109]
 
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: common-name=glutamyl-trna reductase}}
+
{{#set: common-name=4α-carboxy-5α-cholesta-8,24-dien-3β-ol:nad(p)+ 3-dehydrogenase (decarboxylating)}}
−
{{#set: ec-number=ec-1.2.1.70}}
+
{{#set: ec-number=ec-1.1.1.170}}
 
{{#set: nb gene associated=1}}
 
{{#set: nb gene associated=1}}
−
{{#set: nb pathway associated=1}}
+
{{#set: nb pathway associated=3}}
−
{{#set: reconstruction category=orthology|annotation}}
+
{{#set: reconstruction category=annotation}}
−
{{#set: reconstruction tool=pathwaytools|pantograph}}
+
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus|saccharina_japonica_genome}}
+
{{#set: reconstruction source=saccharina_japonica_genome}}

Revision as of 14:26, 26 August 2019

Reaction RXN66-318

  • direction:
    • left-to-right
  • common-name:
    • 4α-carboxy-5α-cholesta-8,24-dien-3β-ol:nad(p)+ 3-dehydrogenase (decarboxylating)
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-6074, zymosterol biosynthesis: PWY-6074
    • 6 reactions found over 14 reactions in the full pathway
  • PWY66-4, cholesterol biosynthesis III (via desmosterol): PWY66-4
    • 14 reactions found over 4 reactions in the full pathway
  • PWY66-341, cholesterol biosynthesis I: PWY66-341
    • 14 reactions found over 18 reactions in the full pathway

Reconstruction information

External links

Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=RXN-17924&oldid=23816"