Difference between revisions of "RXN-17924"

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(Created page with "Category:reaction == Reaction RXN0-882 == * direction: ** left-to-right * common-name: ** 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase * ec-number: ** [http://enzy...")
(Created page with "Category:reaction == Reaction RXN-9140 == * direction: ** left-to-right * common-name: ** 2-epi-5-epi-valiolone synthase * ec-number: ** [http://enzyme.expasy.org/EC/4.2.3...")
Line 1: Line 1:
 
[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction RXN0-882 ==
+
== Reaction RXN-9140 ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
* common-name:
 
* common-name:
−
** 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
+
** 2-epi-5-epi-valiolone synthase
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/1.17.7.1 ec-1.17.7.1]
+
** [http://enzyme.expasy.org/EC/4.2.3.152 ec-4.2.3.152]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[2C-METH-D-ERYTHRITOL-CYCLODIPHOSPHATE]][c] '''+''' 1 [[PROTON]][c] '''+''' 2 [[Reduced-ferredoxins]][c] '''=>''' 1 [[HYDROXY-METHYL-BUTENYL-DIP]][c] '''+''' 2 [[Oxidized-ferredoxins]][c] '''+''' 1 [[WATER]][c]
+
* 1 [[CPD-19339]][c] '''=>''' 1 [[CPD-9663]][c] '''+''' 1 [[Pi]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ05642]]
+
* Gene: [[SJ10220]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
Line 16: Line 16:
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-7560]], methylerythritol phosphate pathway II:
+
* [[PWY-5818]], validamycin biosynthesis:
−
** '''9''' reactions found over '''9''' reactions in the full pathway
+
** '''1''' reactions found over '''13''' reactions in the full pathway
 +
* [[PWY-7752]], gadusol biosynthesis:
 +
** '''1''' reactions found over '''3''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
Line 23: Line 25:
 
== External links  ==
 
== External links  ==
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=26121 26121]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=44185 44185]
−
* LIGAND-RXN:
 
−
** [http://www.genome.jp/dbget-bin/www_bget?R08689 R08689]
 
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: common-name=4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase}}
+
{{#set: common-name=2-epi-5-epi-valiolone synthase}}
−
{{#set: ec-number=ec-1.17.7.1}}
+
{{#set: ec-number=ec-4.2.3.152}}
 
{{#set: nb gene associated=1}}
 
{{#set: nb gene associated=1}}
−
{{#set: nb pathway associated=1}}
+
{{#set: nb pathway associated=2}}
 
{{#set: reconstruction category=annotation|orthology}}
 
{{#set: reconstruction category=annotation|orthology}}
 
{{#set: reconstruction tool=pathwaytools|pantograph}}
 
{{#set: reconstruction tool=pathwaytools|pantograph}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}
 
{{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}

Revision as of 13:15, 14 January 2021

Reaction RXN-9140

  • direction:
    • left-to-right
  • common-name:
    • 2-epi-5-epi-valiolone synthase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-5818, validamycin biosynthesis:
    • 1 reactions found over 13 reactions in the full pathway
  • PWY-7752, gadusol biosynthesis:
    • 1 reactions found over 3 reactions in the full pathway

Reconstruction information

External links





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