Difference between revisions of "RXN-17947"

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(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-10060 RXN-10060] == * direction: ** left-to-right * common-name: ** 3-oxocerotoyl-[acp] reducta...")
(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=3.1.4.14-RXN 3.1.4.14-RXN] == * direction: ** left-to-right * ec-number: ** [http://enzyme.expasy.o...")
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-10060 RXN-10060] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=3.1.4.14-RXN 3.1.4.14-RXN] ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
−
* common-name:
 
−
** 3-oxocerotoyl-[acp] reductase
 
−
** 3-oxoacyl-[acyl-carrier-protein] reductase (nadph)
 
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/1.1.1.100 ec-1.1.1.100]
+
** [http://enzyme.expasy.org/EC/3.1.4.14 ec-3.1.4.14]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[3-oxo-cerotoyl-ACPs]][c] '''+''' 1 [[NADPH]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[NADP]][c] '''+''' 1 [[R-3-hydroxycerotoyl-ACPs]][c]
+
* 1 [[ACP]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[PANTETHEINE-P]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[apo-ACP]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ17743]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
−
* Gene: [[SJ04229]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
* Gene: [[SJ13014]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-6113]], superpathway of mycolate biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6113 PWY-6113]
+
* [[PWY-6012]], acyl carrier protein metabolism: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6012 PWY-6012]
−
** '''8''' reactions found over '''4''' reactions in the full pathway
+
** '''2''' reactions found over '''2''' reactions in the full pathway
−
* [[PWYG-321]], mycolate biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWYG-321 PWYG-321]
 
−
** '''26''' reactions found over '''182''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
+
* category: [[gap-filling]]; source: [[gapfilling_solution_with_meneco_draft_medium]]; tool: [[meneco]]; comment: added for gapfilling
−
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
 +
* RHEA:
 +
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=20538 20538]
 +
* LIGAND-RXN:
 +
** [http://www.genome.jp/dbget-bin/www_bget?R01623 R01623]
 +
* UNIPROT:
 +
** [http://www.uniprot.org/uniprot/P43013 P43013]
 +
** [http://www.uniprot.org/uniprot/P41407 P41407]
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: common-name=3-oxocerotoyl-[acp] reductase|3-oxoacyl-[acyl-carrier-protein] reductase (nadph)}}
+
{{#set: ec-number=ec-3.1.4.14}}
−
{{#set: ec-number=ec-1.1.1.100}}
+
{{#set: nb gene associated=0}}
−
{{#set: nb gene associated=3}}
+
{{#set: nb pathway associated=1}}
−
{{#set: nb pathway associated=2}}
+
{{#set: reconstruction category=gap-filling}}
−
{{#set: reconstruction category=orthology|annotation}}
+
{{#set: reconstruction tool=meneco}}
−
{{#set: reconstruction tool=pantograph|pathwaytools}}
+
{{#set: reconstruction comment=added for gapfilling}}
−
{{#set: reconstruction comment=n.a}}
+
{{#set: reconstruction source=gapfilling_solution_with_meneco_draft_medium}}
−
{{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}
 

Revision as of 09:30, 27 August 2019

Reaction 3.1.4.14-RXN

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-6012, acyl carrier protein metabolism: PWY-6012
    • 2 reactions found over 2 reactions in the full pathway

Reconstruction information

External links





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