Difference between revisions of "RXN-17947"

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(Created page with "Category:reaction == Reaction RXN-10827 == * direction: ** left-to-right * common-name: ** carboxyphosphonoenolpyruvate phosphonomutase * ec-number: ** [http://enzyme.expa...")
(Created page with "Category:reaction == Reaction UROPORIIIMETHYLTRANSA-RXN == * direction: ** left-to-right * common-name: ** s-adenosyl-l-methionine:uroporphyrinogen-iii c-methyltransferase...")
Line 1: Line 1:
 
[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction RXN-10827 ==
+
== Reaction UROPORIIIMETHYLTRANSA-RXN ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
* common-name:
 
* common-name:
−
** carboxyphosphonoenolpyruvate phosphonomutase
+
** s-adenosyl-l-methionine:uroporphyrinogen-iii c-methyltransferase
−
* ec-number:
+
* synonymous:
−
** [http://enzyme.expasy.org/EC/2.7.8.23 ec-2.7.8.23]
+
** uroporphyrinogen methyltransferase
 +
** uroporphyrinogen-iii methyltransferase
 +
** s-adenosyl-l-methionine-dependent uroporphyrinogen iii methylase
 +
** sira
 +
** adenosylmethionine-uroporphyrinogen iii methyltransferase
 +
** s-adenosyl-l-methionine:uroporphyrin-iii c-methyltransferase (incorrect)
 +
** uroporphyrin-iii c-methyltransferase (incorrect)
 +
** cysg
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[1-CARBOXYVINYL-CARBOXYPHOSPHONATE]][c] '''=>''' 1 [[CPD-11740]][c]
+
* 1 [[S-ADENOSYLMETHIONINE]][c] '''+''' 1 [[UROPORPHYRINOGEN-III]][c] '''=>''' 1 [[ADENOSYL-HOMO-CYS]][c] '''+''' 1 [[CPD-9038]][c] '''+''' 1 [[PROTON]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ02830]]
+
* Gene: [[SJ12313]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
** Category: [[orthology]]
 
** Category: [[orthology]]
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
−
* Gene: [[SJ05283]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
* Gene: [[SJ05933]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
* Gene: [[SJ05932]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-7769]], phosalacine biosynthesis:
+
* [[PWY-7376]], cob(II)yrinate a,c-diamide biosynthesis II (late cobalt incorporation):
−
** '''2''' reactions found over '''25''' reactions in the full pathway
+
** '''2''' reactions found over '''13''' reactions in the full pathway
−
* [[PWY-6322]], phosphinothricin tripeptide biosynthesis:
+
* [[PWY-7377]], cob(II)yrinate a,c-diamide biosynthesis I (early cobalt insertion):
−
** '''2''' reactions found over '''25''' reactions in the full pathway
+
** '''4''' reactions found over '''15''' reactions in the full pathway
 +
* [[PWY-5196]], factor 430 biosynthesis:
 +
** '''3''' reactions found over '''7''' reactions in the full pathway
 +
* [[PWY-5194]], siroheme biosynthesis:
 +
** '''4''' reactions found over '''4''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
 +
* RHEA:
 +
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=19090 19090]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R08868 R08868]
+
** [http://www.genome.jp/dbget-bin/www_bget?R07237 R07237]
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: common-name=carboxyphosphonoenolpyruvate phosphonomutase}}
+
{{#set: common-name=s-adenosyl-l-methionine:uroporphyrinogen-iii c-methyltransferase}}
−
{{#set: ec-number=ec-2.7.8.23}}
+
{{#set: synonymous=uroporphyrinogen methyltransferase|uroporphyrin-iii c-methyltransferase (incorrect)|uroporphyrinogen-iii methyltransferase|s-adenosyl-l-methionine-dependent uroporphyrinogen iii methylase|cysg|sira|adenosylmethionine-uroporphyrinogen iii methyltransferase|s-adenosyl-l-methionine:uroporphyrin-iii c-methyltransferase (incorrect)}}
−
{{#set: nb gene associated=4}}
+
{{#set: nb gene associated=1}}
−
{{#set: nb pathway associated=2}}
+
{{#set: nb pathway associated=4}}
 
{{#set: reconstruction category=annotation|orthology}}
 
{{#set: reconstruction category=annotation|orthology}}
−
{{#set: reconstruction tool=pantograph|pathwaytools}}
+
{{#set: reconstruction tool=pathwaytools|pantograph}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}
 
{{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}

Revision as of 15:01, 5 January 2021

Reaction UROPORIIIMETHYLTRANSA-RXN

  • direction:
    • left-to-right
  • common-name:
    • s-adenosyl-l-methionine:uroporphyrinogen-iii c-methyltransferase
  • synonymous:
    • uroporphyrinogen methyltransferase
    • uroporphyrinogen-iii methyltransferase
    • s-adenosyl-l-methionine-dependent uroporphyrinogen iii methylase
    • sira
    • adenosylmethionine-uroporphyrinogen iii methyltransferase
    • s-adenosyl-l-methionine:uroporphyrin-iii c-methyltransferase (incorrect)
    • uroporphyrin-iii c-methyltransferase (incorrect)
    • cysg

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-7376, cob(II)yrinate a,c-diamide biosynthesis II (late cobalt incorporation):
    • 2 reactions found over 13 reactions in the full pathway
  • PWY-7377, cob(II)yrinate a,c-diamide biosynthesis I (early cobalt insertion):
    • 4 reactions found over 15 reactions in the full pathway
  • PWY-5196, factor 430 biosynthesis:
    • 3 reactions found over 7 reactions in the full pathway
  • PWY-5194, siroheme biosynthesis:
    • 4 reactions found over 4 reactions in the full pathway

Reconstruction information

External links





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