Difference between revisions of "RXN-18092"

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(Created page with "Category:reaction == Reaction RXN66-28 == * direction: ** left-to-right * ec-number: ** [http://enzyme.expasy.org/EC/1.3.1.72 ec-1.3.1.72] == Reaction formula == * 1 DES...")
(Created page with "Category:reaction == Reaction 3.4.21.89-RXN == * direction: ** left-to-right * common-name: ** leader peptidase * ec-number: ** [http://enzyme.expasy.org/EC/3.4.21.89 ec-3...")
Line 1: Line 1:
 
[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction RXN66-28 ==
+
== Reaction 3.4.21.89-RXN ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 +
* common-name:
 +
** leader peptidase
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/1.3.1.72 ec-1.3.1.72]
+
** [http://enzyme.expasy.org/EC/3.4.21.89 ec-3.4.21.89]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[DESMOSTEROL-CPD]][c] '''+''' 1 [[NADPH]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[CHOLESTEROL]][c] '''+''' 1 [[NADP]][c]
+
* 1 [[Peptides-with-Leader-Sequence]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[Leader-Sequences]][c] '''+''' 1 [[Peptides-holder]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
 +
* Gene: [[SJ15986]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[SJ21699]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[SJ19533]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[SJ01779]]
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY66-4]], cholesterol biosynthesis III (via desmosterol):
 
−
** '''14''' reactions found over '''4''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[gap-filling]]; source: [[gapfilling_solution_with_meneco_draft_medium]]; tool: [[meneco]]; comment: added for gapfilling
+
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
== External links  ==
 
== External links  ==
−
* LIGAND-RXN:
+
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
−
** [http://www.genome.jp/dbget-bin/www_bget?R01457 R01457]
+
* METANETX-RXN : MNXR115503
 +
* UNIPROT:
 +
** [http://www.uniprot.org/uniprot/Q9RUF9 Q9RUF9]
 +
** [http://www.uniprot.org/uniprot/Q9ZE32 Q9ZE32]
 +
** [http://www.uniprot.org/uniprot/Q9CDG2 Q9CDG2]
 +
** [http://www.uniprot.org/uniprot/Q9KPB1 Q9KPB1]
 +
** [http://www.uniprot.org/uniprot/Q9PBA0 Q9PBA0]
 +
** [http://www.uniprot.org/uniprot/Q57708 Q57708]
 +
** [http://www.uniprot.org/uniprot/O67088 O67088]
 +
** [http://www.uniprot.org/uniprot/Q9JV66 Q9JV66]
 +
** [http://www.uniprot.org/uniprot/Q9PP67 Q9PP67]
 +
** [http://www.uniprot.org/uniprot/Q9I5G7 Q9I5G7]
 +
** [http://www.uniprot.org/uniprot/Q8FF16 Q8FF16]
 +
** [http://www.uniprot.org/uniprot/Q8XA33 Q8XA33]
 +
** [http://www.uniprot.org/uniprot/P41026 P41026]
 +
** [http://www.uniprot.org/uniprot/P41027 P41027]
 +
** [http://www.uniprot.org/uniprot/P37943 P37943]
 +
** [http://www.uniprot.org/uniprot/Q57350 Q57350]
 +
** [http://www.uniprot.org/uniprot/Q7M0V9 Q7M0V9]
 +
** [http://www.uniprot.org/uniprot/P0A1W2 P0A1W2]
 +
** [http://www.uniprot.org/uniprot/P26844 P26844]
 +
** [http://www.uniprot.org/uniprot/P28628 P28628]
 +
** [http://www.uniprot.org/uniprot/P41025 P41025]
 +
** [http://www.uniprot.org/uniprot/Q51876 Q51876]
 +
** [http://www.uniprot.org/uniprot/Q52697 Q52697]
 +
** [http://www.uniprot.org/uniprot/Q45225 Q45225]
 +
** [http://www.uniprot.org/uniprot/P72660 P72660]
 +
** [http://www.uniprot.org/uniprot/P73157 P73157]
 +
** [http://www.uniprot.org/uniprot/O69884 O69884]
 +
** [http://www.uniprot.org/uniprot/P00803 P00803]
 +
</div>
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: ec-number=ec-1.3.1.72}}
+
{{#set: common-name=leader peptidase}}
−
{{#set: nb gene associated=0}}
+
{{#set: ec-number=ec-3.4.21.89}}
−
{{#set: nb pathway associated=1}}
+
{{#set: nb gene associated=4}}
−
{{#set: reconstruction category=gap-filling}}
+
{{#set: nb pathway associated=0}}
−
{{#set: reconstruction tool=meneco}}
+
{{#set: reconstruction category=orthology|annotation}}
−
{{#set: reconstruction comment=added for gapfilling}}
+
{{#set: reconstruction tool=pantograph|pathwaytools}}
−
{{#set: reconstruction source=gapfilling_solution_with_meneco_draft_medium}}
+
{{#set: reconstruction comment=n.a}}
 +
{{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus|saccharina_japonica_genome}}

Revision as of 08:37, 15 March 2021

Reaction 3.4.21.89-RXN

  • direction:
    • left-to-right
  • common-name:
    • leader peptidase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links





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