Difference between revisions of "RXN-18210"

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(Created page with "Category:reaction == Reaction GDPMANDEHYDRA-RXN == * direction: ** left-to-right * common-name: ** gdp-mannose 4,6-dehydratase * ec-number: ** [http://enzyme.expasy.org/EC...")
(Created page with "Category:reaction == Reaction RXN-9733 == * direction: ** left-to-right * common-name: ** 4-sulfomuconolactone hydrolase * ec-number: ** [http://enzyme.expasy.org/EC/3.1.1...")
Line 1: Line 1:
 
[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction GDPMANDEHYDRA-RXN ==
+
== Reaction RXN-9733 ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
* common-name:
 
* common-name:
−
** gdp-mannose 4,6-dehydratase
+
** 4-sulfomuconolactone hydrolase
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/4.2.1.47 ec-4.2.1.47]
+
** [http://enzyme.expasy.org/EC/3.1.1.92 ec-3.1.1.92]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[GDP-MANNOSE]][c] '''=>''' 1 [[GDP-4-DEHYDRO-6-DEOXY-D-MANNOSE]][c] '''+''' 1 [[WATER]][c]
+
* 1 [[CPD-10420]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[CPD-294]][c] '''+''' 2 [[PROTON]][c] '''+''' 1 [[SO3]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ04008]]
+
* Gene: [[SJ19104]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
* Gene: [[SJ21655]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-5739]], GDP-D-perosamine biosynthesis:
+
* [[PWY-6041]], 4-sulfocatechol degradation:
−
** '''1''' reactions found over '''2''' reactions in the full pathway
+
** '''1''' reactions found over '''4''' reactions in the full pathway
−
* [[PWY-7573]], GDP-mycosamine biosynthesis:
 
−
** '''1''' reactions found over '''3''' reactions in the full pathway
 
−
* [[PWY-5740]], GDP-L-colitose biosynthesis:
 
−
** '''1''' reactions found over '''5''' reactions in the full pathway
 
−
* [[PWY-66]], GDP-L-fucose biosynthesis I (from GDP-D-mannose):
 
−
** '''2''' reactions found over '''3''' reactions in the full pathway
 
−
* [[GDPRHAMSYN-PWY]], GDP-D-rhamnose biosynthesis:
 
−
** '''1''' reactions found over '''2''' reactions in the full pathway
 
−
* [[PWY-5738]], GDP-6-deoxy-D-talose biosynthesis:
 
−
** '''1''' reactions found over '''2''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
−
* category: [[orthology]]; source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
 +
* LIGAND-RXN:
 +
** [http://www.genome.jp/dbget-bin/www_bget?R05420 R05420]
 +
* METANETX-RXN : MNXR109568
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=23821 23821]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=33712 33712]
−
* LIGAND-RXN:
 
−
** [http://www.genome.jp/dbget-bin/www_bget?R00888 R00888]
 
−
* UNIPROT:
 
−
** [http://www.uniprot.org/uniprot/Q84439 Q84439]
 
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: common-name=gdp-mannose 4,6-dehydratase}}
+
{{#set: common-name=4-sulfomuconolactone hydrolase}}
−
{{#set: ec-number=ec-4.2.1.47}}
+
{{#set: ec-number=ec-3.1.1.92}}
−
{{#set: nb gene associated=2}}
+
{{#set: nb gene associated=1}}
−
{{#set: nb pathway associated=6}}
+
{{#set: nb pathway associated=1}}
−
{{#set: reconstruction category=annotation|orthology}}
+
{{#set: reconstruction category=annotation}}
−
{{#set: reconstruction tool=pathwaytools|pantograph}}
+
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=output_pantograph_arabidopsis_thaliana|saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}
+
{{#set: reconstruction source=saccharina_japonica_genome}}

Revision as of 08:33, 15 March 2021

Reaction RXN-9733

  • direction:
    • left-to-right
  • common-name:
    • 4-sulfomuconolactone hydrolase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-6041, 4-sulfocatechol degradation:
    • 1 reactions found over 4 reactions in the full pathway

Reconstruction information

External links

  • LIGAND-RXN:
  • METANETX-RXN : MNXR109568
  • RHEA:





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