Difference between revisions of "RXN-18210"

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(Created page with "Category:reaction == Reaction GDPMANDEHYDRA-RXN == * direction: ** left-to-right * common-name: ** gdp-mannose 4,6-dehydratase * ec-number: ** [http://enzyme.expasy.org/EC...")
(Created page with "Category:reaction == Reaction HISTOLDEHYD-RXN == * direction: ** reversible * common-name: ** histidinol dehydrogenase == Reaction formula == * 1 HISTIDINOL[c] '''+'''...")
Line 1: Line 1:
 
[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction GDPMANDEHYDRA-RXN ==
+
== Reaction HISTOLDEHYD-RXN ==
 
* direction:
 
* direction:
−
** left-to-right
+
** reversible
 
* common-name:
 
* common-name:
−
** gdp-mannose 4,6-dehydratase
+
** histidinol dehydrogenase
−
* ec-number:
 
−
** [http://enzyme.expasy.org/EC/4.2.1.47 ec-4.2.1.47]
 
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[GDP-MANNOSE]][c] '''=>''' 1 [[GDP-4-DEHYDRO-6-DEOXY-D-MANNOSE]][c] '''+''' 1 [[WATER]][c]
+
* 1 [[HISTIDINOL]][c] '''+''' 1 [[NAD]][c] '''<=>''' 1 [[HISTIDINAL]][c] '''+''' 1 [[NADH]][c] '''+''' 1 [[PROTON]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ04008]]
+
* Gene: [[SJ07444]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[SJ18961]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
** Category: [[orthology]]
 
** Category: [[orthology]]
 
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
−
* Gene: [[SJ21655]]
+
* Gene: [[SJ10107]]
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
 
** Category: [[orthology]]
 
** Category: [[orthology]]
−
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
+
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-5739]], GDP-D-perosamine biosynthesis:
+
* [[HISTSYN-PWY]], L-histidine biosynthesis:
−
** '''1''' reactions found over '''2''' reactions in the full pathway
+
** '''10''' reactions found over '''10''' reactions in the full pathway
−
* [[PWY-7573]], GDP-mycosamine biosynthesis:
 
−
** '''1''' reactions found over '''3''' reactions in the full pathway
 
−
* [[PWY-5740]], GDP-L-colitose biosynthesis:
 
−
** '''1''' reactions found over '''5''' reactions in the full pathway
 
−
* [[PWY-66]], GDP-L-fucose biosynthesis I (from GDP-D-mannose):
 
−
** '''2''' reactions found over '''3''' reactions in the full pathway
 
−
* [[GDPRHAMSYN-PWY]], GDP-D-rhamnose biosynthesis:
 
−
** '''1''' reactions found over '''2''' reactions in the full pathway
 
−
* [[PWY-5738]], GDP-6-deoxy-D-talose biosynthesis:
 
−
** '''1''' reactions found over '''2''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 +
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* category: [[orthology]]; source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
−
* category: [[orthology]]; source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
−
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
 +
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=23821 23821]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=33799 33799]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R00888 R00888]
+
** [http://www.genome.jp/dbget-bin/www_bget?R03012 R03012]
 
* UNIPROT:
 
* UNIPROT:
−
** [http://www.uniprot.org/uniprot/Q84439 Q84439]
+
** [http://www.uniprot.org/uniprot/P24226 P24226]
−
{{#set: direction=left-to-right}}
+
** [http://www.uniprot.org/uniprot/P44001 P44001]
−
{{#set: common-name=gdp-mannose 4,6-dehydratase}}
+
** [http://www.uniprot.org/uniprot/O34651 O34651]
−
{{#set: ec-number=ec-4.2.1.47}}
+
** [http://www.uniprot.org/uniprot/P63950 P63950]
−
{{#set: nb gene associated=2}}
+
** [http://www.uniprot.org/uniprot/Q9RSI4 Q9RSI4]
−
{{#set: nb pathway associated=6}}
+
** [http://www.uniprot.org/uniprot/Q02136 Q02136]
 +
** [http://www.uniprot.org/uniprot/Q9JTH9 Q9JTH9]
 +
** [http://www.uniprot.org/uniprot/O30027 O30027]
 +
** [http://www.uniprot.org/uniprot/Q9PM77 Q9PM77]
 +
** [http://www.uniprot.org/uniprot/P10370 P10370]
 +
** [http://www.uniprot.org/uniprot/P06988 P06988]
 +
** [http://www.uniprot.org/uniprot/O66976 O66976]
 +
** [http://www.uniprot.org/uniprot/Q58851 Q58851]
 +
** [http://www.uniprot.org/uniprot/O26327 O26327]
 +
** [http://www.uniprot.org/uniprot/Q9X0D1 Q9X0D1]
 +
** [http://www.uniprot.org/uniprot/P18786 P18786]
 +
** [http://www.uniprot.org/uniprot/P28736 P28736]
 +
** [http://www.uniprot.org/uniprot/P45353 P45353]
 +
** [http://www.uniprot.org/uniprot/Q12670 Q12670]
 +
** [http://www.uniprot.org/uniprot/P72946 P72946]
 +
** [http://www.uniprot.org/uniprot/P73058 P73058]
 +
** [http://www.uniprot.org/uniprot/P00815 P00815]
 +
** [http://www.uniprot.org/uniprot/P07685 P07685]
 +
** [http://www.uniprot.org/uniprot/P16245 P16245]
 +
</div>
 +
{{#set: direction=reversible}}
 +
{{#set: common-name=histidinol dehydrogenase}}
 +
{{#set: nb gene associated=3}}
 +
{{#set: nb pathway associated=1}}
 
{{#set: reconstruction category=annotation|orthology}}
 
{{#set: reconstruction category=annotation|orthology}}
 
{{#set: reconstruction tool=pathwaytools|pantograph}}
 
{{#set: reconstruction tool=pathwaytools|pantograph}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction source=output_pantograph_arabidopsis_thaliana|saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}
 
{{#set: reconstruction source=output_pantograph_arabidopsis_thaliana|saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}

Revision as of 13:14, 14 January 2021

Reaction HISTOLDEHYD-RXN

  • direction:
    • reversible
  • common-name:
    • histidinol dehydrogenase

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • HISTSYN-PWY, L-histidine biosynthesis:
    • 10 reactions found over 10 reactions in the full pathway

Reconstruction information

External links





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