Difference between revisions of "RXN-1826"

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(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=PHOSPHASERSYN-RXN PHOSPHASERSYN-RXN] == * direction: ** reversible * common-name: ** cdp-diacylglyc...")
(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=XANTHINE-OXIDASE-RXN XANTHINE-OXIDASE-RXN] == * direction: ** left-to-right * common-name: ** xanth...")
Line 1: Line 1:
 
[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=PHOSPHASERSYN-RXN PHOSPHASERSYN-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=XANTHINE-OXIDASE-RXN XANTHINE-OXIDASE-RXN] ==
 
* direction:
 
* direction:
−
** reversible
+
** left-to-right
 
* common-name:
 
* common-name:
−
** cdp-diacylglycerol-serine o-phosphatidyltransferase
+
** xanthine oxidase
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/2.7.8.8 ec-2.7.8.8]
+
** [http://enzyme.expasy.org/EC/1.17.3.2 ec-1.17.3.2]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[CDPDIACYLGLYCEROL]][c] '''+''' 1 [[SER]][c] '''<=>''' 1 [[CMP]][c] '''+''' 1 [[L-1-PHOSPHATIDYL-SERINE]][c] '''+''' 1 [[PROTON]][c]
+
* 1 [[OXYGEN-MOLECULE]][c] '''+''' 1 [[WATER]][c] '''+''' 1 [[XANTHINE]][c] '''=>''' 1 [[HYDROGEN-PEROXIDE]][c] '''+''' 1 [[URATE]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ19545]]
+
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 +
* Gene: [[SJ13100]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[SJ05673]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[SJ13101]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[SJ05660]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
* Gene: [[SJ05668]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
* Gene: [[SJ13095]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
+
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[SJ05674]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
** Category: [[orthology]]
 
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
* Gene: [[SJ13098]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
</div>
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PHOSLIPSYN2-PWY]], superpathway of phospholipid biosynthesis II (plants): [http://metacyc.org/META/NEW-IMAGE?object=PHOSLIPSYN2-PWY PHOSLIPSYN2-PWY]
+
* [[PWY-6999]], theophylline degradation: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6999 PWY-6999]
−
** '''13''' reactions found over '''3''' reactions in the full pathway
+
** '''2''' reactions found over '''9''' reactions in the full pathway
−
* [[PWY-5669]], phosphatidylserine and phosphatidylethanolamine biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5669 PWY-5669]
+
* [[PWY-6538]], caffeine degradation III (bacteria, via demethylation): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6538 PWY-6538]
−
** '''1''' reactions found over '''2''' reactions in the full pathway
+
** '''2''' reactions found over '''7''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 +
* category: [[orthology]]; source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 +
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=16916 16916]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=21133 21133]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R01800 R01800]
+
** [http://www.genome.jp/dbget-bin/www_bget?R02107 R02107]
 
* UNIPROT:
 
* UNIPROT:
−
** [http://www.uniprot.org/uniprot/P39823 P39823]
+
** [http://www.uniprot.org/uniprot/P47989 P47989]
−
** [http://www.uniprot.org/uniprot/O27106 O27106]
+
** [http://www.uniprot.org/uniprot/Q00519 Q00519]
−
** [http://www.uniprot.org/uniprot/P96282 P96282]
+
** [http://www.uniprot.org/uniprot/Q62637 Q62637]
−
** [http://www.uniprot.org/uniprot/Q9ZM68 Q9ZM68]
+
{{#set: direction=left-to-right}}
−
** [http://www.uniprot.org/uniprot/Q58609 Q58609]
+
{{#set: common-name=xanthine oxidase}}
−
** [http://www.uniprot.org/uniprot/O28235 O28235]
+
{{#set: ec-number=ec-1.17.3.2}}
−
** [http://www.uniprot.org/uniprot/O84833 O84833]
+
{{#set: nb gene associated=8}}
−
** [http://www.uniprot.org/uniprot/Q9Z6S6 Q9Z6S6]
 
−
** [http://www.uniprot.org/uniprot/Q9JR61 Q9JR61]
 
−
** [http://www.uniprot.org/uniprot/Q9PNI0 Q9PNI0]
 
−
** [http://www.uniprot.org/uniprot/Q9ZDT3 Q9ZDT3]
 
−
** [http://www.uniprot.org/uniprot/Q48269 Q48269]
 
−
** [http://www.uniprot.org/uniprot/Q8X9F5 Q8X9F5]
 
−
** [http://www.uniprot.org/uniprot/P08456 P08456]
 
−
** [http://www.uniprot.org/uniprot/P25578 P25578]
 
−
</div>
 
−
{{#set: direction=reversible}}
 
−
{{#set: common-name=cdp-diacylglycerol-serine o-phosphatidyltransferase}}
 
−
{{#set: ec-number=ec-2.7.8.8}}
 
−
{{#set: nb gene associated=1}}
 
 
{{#set: nb pathway associated=2}}
 
{{#set: nb pathway associated=2}}
−
{{#set: reconstruction category=orthology|annotation}}
+
{{#set: reconstruction category=annotation|orthology}}
 
{{#set: reconstruction tool=pantograph|pathwaytools}}
 
{{#set: reconstruction tool=pantograph|pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}
+
{{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus|output_pantograph_arabidopsis_thaliana|saccharina_japonica_genome}}

Revision as of 09:31, 27 August 2019

Reaction XANTHINE-OXIDASE-RXN

  • direction:
    • left-to-right
  • common-name:
    • xanthine oxidase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-6999, theophylline degradation: PWY-6999
    • 2 reactions found over 9 reactions in the full pathway
  • PWY-6538, caffeine degradation III (bacteria, via demethylation): PWY-6538
    • 2 reactions found over 7 reactions in the full pathway

Reconstruction information

External links





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