Difference between revisions of "RXN-18301"

From metabolic_network
Jump to navigation Jump to search
(Created page with "Category:reaction == Reaction IMIDPHOSDEHYD-RXN == * direction: ** left-to-right * common-name: ** imidazoleglycerol-phosphate dehydratase * ec-number: ** [http://enzyme.e...")
(Created page with "Category:reaction == Reaction RXN-18301 == * direction: ** left-to-right * common-name: ** galactosylceramide sulfotransferase ** β-galactosyl-n-acylsphingosine sulfo...")
 
(3 intermediate revisions by one other user not shown)
Line 1: Line 1:
 
[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction IMIDPHOSDEHYD-RXN ==
+
== Reaction RXN-18301 ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
* common-name:
 
* common-name:
−
** imidazoleglycerol-phosphate dehydratase
+
** galactosylceramide sulfotransferase
 +
** β-galactosyl-n-acylsphingosine sulfotransferase
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/4.2.1.19 ec-4.2.1.19]
+
** [http://enzyme.expasy.org/EC/2.8.2.11 ec-2.8.2.11]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[D-ERYTHRO-IMIDAZOLE-GLYCEROL-P]][c] '''=>''' 1 [[IMIDAZOLE-ACETOL-P]][c] '''+''' 1 [[WATER]][c]
+
* 1 [[A-GALACTOSYLCERAMIDE]][c] '''+''' 1 [[PAPS]][c] '''=>''' 1 [[3-5-ADP]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[galactosylceramide-sulfate]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ17441]]
+
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 +
* Gene: [[SJ13394]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[SJ05173]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[SJ20074]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[SJ21441]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[SJ09270]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[SJ05785]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[SJ18184]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[SJ13393]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[SJ11525]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[SJ14141]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[SJ13400]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[SJ11352]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
** Category: [[orthology]]
+
</div>
−
*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[HISTSYN-PWY]], L-histidine biosynthesis:
+
* [[PWY-7840]], gala-series glycosphingolipids biosynthesis:
−
** '''10''' reactions found over '''10''' reactions in the full pathway
+
** '''3''' reactions found over '''5''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[orthology]]; source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* category: [[orthology]]; source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
−
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* METANETX-RXN : MNXR121579
−
* RHEA:
 
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=11041 11041]
 
−
* LIGAND-RXN:
 
−
** [http://www.genome.jp/dbget-bin/www_bget?R03457 R03457]
 
−
* UNIPROT:
 
−
** [http://www.uniprot.org/uniprot/Q58109 Q58109]
 
−
** [http://www.uniprot.org/uniprot/P06633 P06633]
 
−
** [http://www.uniprot.org/uniprot/P10368 P10368]
 
−
** [http://www.uniprot.org/uniprot/P06987 P06987]
 
−
** [http://www.uniprot.org/uniprot/Q9PM76 Q9PM76]
 
−
** [http://www.uniprot.org/uniprot/P44327 P44327]
 
−
** [http://www.uniprot.org/uniprot/Q02134 Q02134]
 
−
** [http://www.uniprot.org/uniprot/P64371 P64371]
 
−
** [http://www.uniprot.org/uniprot/Q12578 Q12578]
 
−
** [http://www.uniprot.org/uniprot/P18787 P18787]
 
−
** [http://www.uniprot.org/uniprot/P16247 P16247]
 
−
** [http://www.uniprot.org/uniprot/P28624 P28624]
 
−
** [http://www.uniprot.org/uniprot/P34041 P34041]
 
−
** [http://www.uniprot.org/uniprot/Q02986 Q02986]
 
−
** [http://www.uniprot.org/uniprot/P40374 P40374]
 
−
** [http://www.uniprot.org/uniprot/P48054 P48054]
 
−
** [http://www.uniprot.org/uniprot/Q43072 Q43072]
 
−
** [http://www.uniprot.org/uniprot/Q9X7B9 Q9X7B9]
 
−
** [http://www.uniprot.org/uniprot/O48932 O48932]
 
−
</div>
 
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: common-name=imidazoleglycerol-phosphate dehydratase}}
+
{{#set: common-name=galactosylceramide sulfotransferase|&beta;-galactosyl-n-acylsphingosine sulfotransferase}}
−
{{#set: ec-number=ec-4.2.1.19}}
+
{{#set: ec-number=ec-2.8.2.11}}
−
{{#set: nb gene associated=1}}
+
{{#set: nb gene associated=12}}
 
{{#set: nb pathway associated=1}}
 
{{#set: nb pathway associated=1}}
−
{{#set: reconstruction category=annotation|orthology}}
+
{{#set: reconstruction category=annotation}}
−
{{#set: reconstruction tool=pathwaytools|pantograph}}
+
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=output_pantograph_nannochloropsis_salina|output_pantograph_arabidopsis_thaliana|saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}
+
{{#set: reconstruction source=saccharina_japonica_genome}}

Latest revision as of 11:19, 18 March 2021

Reaction RXN-18301

  • direction:
    • left-to-right
  • common-name:
    • galactosylceramide sulfotransferase
    • β-galactosyl-n-acylsphingosine sulfotransferase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-7840, gala-series glycosphingolipids biosynthesis:
    • 3 reactions found over 5 reactions in the full pathway

Reconstruction information

External links

  • METANETX-RXN : MNXR121579





Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=RXN-18301&oldid=140424"