Difference between revisions of "RXN-18332"

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(Created page with "Category:reaction == Reaction PANTOTHENATE-KIN-RXN == * direction: ** left-to-right * common-name: ** pantothenate kinase * ec-number: ** [http://enzyme.expasy.org/EC/2.7....")
(Created page with "Category:reaction == Reaction RXN-18332 == * direction: ** reversible * common-name: ** udp-l-rhamnose synthase * ec-number: ** [http://enzyme.expasy.org/EC/5.1.3 ec-5.1.3...")
 
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction PANTOTHENATE-KIN-RXN ==
+
== Reaction RXN-18332 ==
 
* direction:
 
* direction:
−
** left-to-right
+
** reversible
 
* common-name:
 
* common-name:
−
** pantothenate kinase
+
** udp-l-rhamnose synthase
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/2.7.1.33 ec-2.7.1.33]
+
** [http://enzyme.expasy.org/EC/5.1.3 ec-5.1.3]
−
* synonymous:
 
−
** type iii pantothenate kinase
 
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[ATP]][c] '''+''' 1 [[PANTOTHENATE]][c] '''=>''' 1 [[4-P-PANTOTHENATE]][c] '''+''' 1 [[ADP]][c] '''+''' 1 [[PROTON]][c]
+
* 1 [[CPD-663]][c] '''<=>''' 1 [[CPD-11540]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ11632]]
+
* Gene: [[SJ16241]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
+
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
* Gene: [[SJ11571]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-3961]], phosphopantothenate biosynthesis II:
+
* [[PWY-3261]], UDP-&beta;-L-rhamnose biosynthesis:
−
** '''1''' reactions found over '''3''' reactions in the full pathway
+
** '''3''' reactions found over '''3''' reactions in the full pathway
−
* [[PANTO-PWY]], phosphopantothenate biosynthesis I:
 
−
** '''4''' reactions found over '''4''' reactions in the full pathway
 
−
* [[COA-PWY-1]], superpathway of coenzyme A biosynthesis III (mammals):
 
−
** '''2''' reactions found over '''1''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
−
* RHEA:
+
* METANETX-RXN : MNXR121602
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=16374 16374]
+
{{#set: direction=reversible}}
−
* LIGAND-RXN:
+
{{#set: common-name=udp-l-rhamnose synthase}}
−
** [http://www.genome.jp/dbget-bin/www_bget?R03018 R03018]
+
{{#set: ec-number=ec-5.1.3}}
−
* UNIPROT:
+
{{#set: nb gene associated=1}}
−
** [http://www.uniprot.org/uniprot/P0A6I3 P0A6I3]
+
{{#set: nb pathway associated=1}}
−
** [http://www.uniprot.org/uniprot/Q9CFM3 Q9CFM3]
+
{{#set: reconstruction category=annotation}}
−
** [http://www.uniprot.org/uniprot/P44793 P44793]
+
{{#set: reconstruction tool=pathwaytools}}
−
{{#set: direction=left-to-right}}
 
−
{{#set: common-name=pantothenate kinase}}
 
−
{{#set: ec-number=ec-2.7.1.33}}
 
−
{{#set: synonymous=type iii pantothenate kinase}}
 
−
{{#set: nb gene associated=2}}
 
−
{{#set: nb pathway associated=3}}
 
−
{{#set: reconstruction category=annotation|orthology}}
 
−
{{#set: reconstruction tool=pathwaytools|pantograph}}
 
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}
+
{{#set: reconstruction source=saccharina_japonica_genome}}

Latest revision as of 11:19, 18 March 2021

Reaction RXN-18332

  • direction:
    • reversible
  • common-name:
    • udp-l-rhamnose synthase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-3261, UDP-β-L-rhamnose biosynthesis:
    • 3 reactions found over 3 reactions in the full pathway

Reconstruction information

External links

  • METANETX-RXN : MNXR121602





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