Difference between revisions of "RXN-1882"

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(Created page with "Category:reaction == Reaction RXN-11277 == * direction: ** left-to-right * common-name: ** diacylglycerol pyrophosphate phosphatase * ec-number: ** [http://enzyme.expasy.o...")
(Created page with "Category:reaction == Reaction RXN-16389 == * direction: ** left-to-right * common-name: ** 16-hydroxypalmitoyl-coa synthetase ** long-chain fatty acid-coa ligase * ec-numb...")
Line 1: Line 1:
 
[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction RXN-11277 ==
+
== Reaction RXN-16389 ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
* common-name:
 
* common-name:
−
** diacylglycerol pyrophosphate phosphatase
+
** 16-hydroxypalmitoyl-coa synthetase
 +
** long-chain fatty acid-coa ligase
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/3.1.3.81 ec-3.1.3.81]
+
** [http://enzyme.expasy.org/EC/6.2.1.3 ec-6.2.1.3]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[DIACYLGLYCEROL-PYROPHOSPHATE]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[L-PHOSPHATIDATE]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[Pi]][c]
+
* 1 [[16-HYDROXYPALMITATE]][c] '''+''' 1 [[ATP]][c] '''+''' 1 [[CO-A]][c] '''=>''' 1 [[AMP]][c] '''+''' 1 [[CPD-17621]][c] '''+''' 1 [[PPI]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ13957]]
+
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 +
* Gene: [[SJ08690]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
* Gene: [[SJ21389]]
+
* Gene: [[SJ13972]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
* Gene: [[SJ08692]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[SJ05591]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[SJ08691]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
* Gene: [[SJ03650]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
</div>
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-7039]], phosphatidate metabolism, as a signaling molecule:
+
* [[PWY-321]], cutin biosynthesis:
−
** '''4''' reactions found over '''5''' reactions in the full pathway
+
** '''3''' reactions found over '''16''' reactions in the full pathway
 +
* [[PWY-1121]], suberin monomers biosynthesis:
 +
** '''9''' reactions found over '''19''' reactions in the full pathway
 +
* [[PWY-6733]], sporopollenin precursors biosynthesis:
 +
** '''8''' reactions found over '''18''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
== External links  ==
 
== External links  ==
−
* RHEA:
 
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=27449 27449]
 
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: common-name=diacylglycerol pyrophosphate phosphatase}}
+
{{#set: common-name=16-hydroxypalmitoyl-coa synthetase|long-chain fatty acid-coa ligase}}
−
{{#set: ec-number=ec-3.1.3.81}}
+
{{#set: ec-number=ec-6.2.1.3}}
−
{{#set: nb gene associated=2}}
+
{{#set: nb gene associated=6}}
−
{{#set: nb pathway associated=1}}
+
{{#set: nb pathway associated=3}}
−
{{#set: reconstruction category=annotation}}
+
{{#set: reconstruction category=annotation|orthology}}
−
{{#set: reconstruction tool=pathwaytools}}
+
{{#set: reconstruction tool=pathwaytools|pantograph}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=saccharina_japonica_genome}}
+
{{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}

Revision as of 11:22, 15 January 2021

Reaction RXN-16389

  • direction:
    • left-to-right
  • common-name:
    • 16-hydroxypalmitoyl-coa synthetase
    • long-chain fatty acid-coa ligase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-321, cutin biosynthesis:
    • 3 reactions found over 16 reactions in the full pathway
  • PWY-1121, suberin monomers biosynthesis:
    • 9 reactions found over 19 reactions in the full pathway
  • PWY-6733, sporopollenin precursors biosynthesis:
    • 8 reactions found over 18 reactions in the full pathway

Reconstruction information

External links

Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=RXN-1882&oldid=114994"