Difference between revisions of "RXN-1882"

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(Created page with "Category:reaction == Reaction RXN-16389 == * direction: ** left-to-right * common-name: ** 16-hydroxypalmitoyl-coa synthetase ** long-chain fatty acid-coa ligase * ec-numb...")
(Created page with "Category:reaction == Reaction 3.2.1.96-RXN == * direction: ** left-to-right * ec-number: ** [http://enzyme.expasy.org/EC/3.2.1.96 ec-3.2.1.96] == Reaction formula == * 1 [...")
Line 1: Line 1:
 
[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction RXN-16389 ==
+
== Reaction 3.2.1.96-RXN ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
−
* common-name:
 
−
** 16-hydroxypalmitoyl-coa synthetase
 
−
** long-chain fatty acid-coa ligase
 
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/6.2.1.3 ec-6.2.1.3]
+
** [http://enzyme.expasy.org/EC/3.2.1.96 ec-3.2.1.96]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[16-HYDROXYPALMITATE]][c] '''+''' 1 [[ATP]][c] '''+''' 1 [[CO-A]][c] '''=>''' 1 [[AMP]][c] '''+''' 1 [[CPD-17621]][c] '''+''' 1 [[PPI]][c]
+
* 1 [[WATER]][c] '''+''' 1 [[a-glycopeptide-D-mannosyl-Nsup4sup-N-ace]][c] '''=>''' 1 [[CPD-14375]][c] '''+''' 1 [[N-acetyl-D-glucosamine-asparagine]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* Gene: [[SJ12484]]
−
* Gene: [[SJ08690]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
* Gene: [[SJ13972]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
* Gene: [[SJ08692]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
* Gene: [[SJ05591]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
−
* Gene: [[SJ08691]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
* Gene: [[SJ03650]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
** Category: [[orthology]]
 
** Category: [[orthology]]
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
−
</div>
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-321]], cutin biosynthesis:
 
−
** '''3''' reactions found over '''16''' reactions in the full pathway
 
−
* [[PWY-1121]], suberin monomers biosynthesis:
 
−
** '''9''' reactions found over '''19''' reactions in the full pathway
 
−
* [[PWY-6733]], sporopollenin precursors biosynthesis:
 
−
** '''8''' reactions found over '''18''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
== External links  ==
 
== External links  ==
 +
* METANETX-RXN : MNXR115413
 +
* UNIPROT:
 +
** [http://www.uniprot.org/uniprot/P13670 P13670]
 +
** [http://www.uniprot.org/uniprot/P49610 P49610]
 +
** [http://www.uniprot.org/uniprot/Q9CFI4 Q9CFI4]
 +
** [http://www.uniprot.org/uniprot/Q9R5G5 Q9R5G5]
 +
** [http://www.uniprot.org/uniprot/P04067 P04067]
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: common-name=16-hydroxypalmitoyl-coa synthetase|long-chain fatty acid-coa ligase}}
+
{{#set: ec-number=ec-3.2.1.96}}
−
{{#set: ec-number=ec-6.2.1.3}}
+
{{#set: nb gene associated=1}}
−
{{#set: nb gene associated=6}}
+
{{#set: nb pathway associated=0}}
−
{{#set: nb pathway associated=3}}
+
{{#set: reconstruction category=orthology|annotation}}
−
{{#set: reconstruction category=annotation|orthology}}
+
{{#set: reconstruction tool=pantograph|pathwaytools}}
−
{{#set: reconstruction tool=pathwaytools|pantograph}}
 
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}
+
{{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus|saccharina_japonica_genome}}

Revision as of 08:34, 15 March 2021

Reaction 3.2.1.96-RXN

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links





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