Difference between revisions of "RXN-19200"

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(Created page with "Category:reaction == Reaction CHONDROITIN-4-SULFOTRANSFERASE-RXN == * direction: ** left-to-right * common-name: ** chondroitin 4-sulfotransferase * ec-number: ** [http://...")
(Created page with "Category:reaction == Reaction RXN-19200 == * direction: ** left-to-right * ec-number: ** [http://enzyme.expasy.org/EC/1.23.5 ec-1.23.5] == Reaction formula == * 1 ASCORB...")
 
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[[Category:reaction]]
 
[[Category:reaction]]
== Reaction CHONDROITIN-4-SULFOTRANSFERASE-RXN ==
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== Reaction RXN-19200 ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
* common-name:
 
** chondroitin 4-sulfotransferase
 
 
* ec-number:
 
* ec-number:
** [http://enzyme.expasy.org/EC/2.8.2.5 ec-2.8.2.5]
+
** [http://enzyme.expasy.org/EC/1.23.5 ec-1.23.5]
 
== Reaction formula ==
 
== Reaction formula ==
* 1 [[Chondroitin-N-acetyl-galactosamines]][c] '''+''' 1 [[PAPS]][c] '''=>''' 1 [[3-5-ADP]][c] '''+''' 1 [[CHONDROITIN-4-SULFATE]][c] '''+''' 1 [[PROTON]][c]
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* 1 [[ASCORBATE]][c] '''+''' 1 [[CPD-20680]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[CPD-20693]][c] '''+''' 1 [[L-DEHYDRO-ASCORBATE]][c] '''+''' 1 [[WATER]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
* Gene: [[SJ00043]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
* [[PWY-6567]], chondroitin sulfate biosynthesis (late stages):
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* [[PWY-7949]], diadinoxanthin and diatoxanthin interconversion:
** '''2''' reactions found over '''5''' reactions in the full pathway
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** '''2''' reactions found over '''2''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* category: [[manual]]; source: [[sjap]]; tool: [[curation]]; comment: transformation of diatoxanthin into diadinoxanthin (second cycle of xanthophylls)
 
== External links  ==
 
== External links  ==
* METANETX-RXN : MNXR115775
 
* RHEA:
 
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=16102 16102]
 
* LIGAND-RXN:
 
** [http://www.genome.jp/dbget-bin/www_bget?R02180 R02180]
 
* UNIPROT:
 
** [http://www.uniprot.org/uniprot/Q9NPF2 Q9NPF2]
 
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
{{#set: common-name=chondroitin 4-sulfotransferase}}
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{{#set: ec-number=ec-1.23.5}}
{{#set: ec-number=ec-2.8.2.5}}
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{{#set: nb gene associated=0}}
{{#set: nb gene associated=1}}
 
 
{{#set: nb pathway associated=1}}
 
{{#set: nb pathway associated=1}}
{{#set: reconstruction category=annotation}}
+
{{#set: reconstruction category=manual}}
{{#set: reconstruction tool=pathwaytools}}
+
{{#set: reconstruction tool=curation}}
{{#set: reconstruction comment=n.a}}
+
{{#set: reconstruction comment=transformation of diatoxanthin into diadinoxanthin (second cycle of xanthophylls)}}
{{#set: reconstruction source=saccharina_japonica_genome}}
+
{{#set: reconstruction source=sjap}}

Latest revision as of 11:20, 18 March 2021

Reaction RXN-19200

  • direction:
    • left-to-right
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-7949, diadinoxanthin and diatoxanthin interconversion:
    • 2 reactions found over 2 reactions in the full pathway

Reconstruction information

  • category: manual; source: sjap; tool: curation; comment: transformation of diatoxanthin into diadinoxanthin (second cycle of xanthophylls)

External links