Difference between revisions of "RXN-2006"
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(Created page with "Category:reaction == Reaction RXN-10960 == * direction: ** left-to-right * common-name: ** inositol-3,4-bisphosphate 4-phosphatase * ec-number: ** [http://enzyme.expasy.or...") |
(Created page with "Category:reaction == Reaction RXN-2464 == * direction: ** reversible * common-name: ** 4-hydroxy-4-methyl-2-oxoglutarate aldolase * ec-number: ** [http://enzyme.expasy.org...") |
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| Line 1: | Line 1: | ||
[[Category:reaction]] | [[Category:reaction]] | ||
| − | == Reaction RXN- | + | == Reaction RXN-2464 == |
* direction: | * direction: | ||
| − | ** | + | ** reversible |
* common-name: | * common-name: | ||
| − | ** | + | ** 4-hydroxy-4-methyl-2-oxoglutarate aldolase |
* ec-number: | * ec-number: | ||
| − | ** [http://enzyme.expasy.org/EC/ | + | ** [http://enzyme.expasy.org/EC/4.1.3.17 ec-4.1.3.17] |
== Reaction formula == | == Reaction formula == | ||
| − | * 1 [[ | + | * 1 [[4-OH-4-ACETYL-2-OXOGLUTARATE]][c] '''<=>''' 1 [[OXALACETIC_ACID]][c] '''+''' 1 [[PYRUVATE]][c] |
== Gene(s) associated with this reaction == | == Gene(s) associated with this reaction == | ||
| − | * Gene: [[ | + | * Gene: [[SJ13180]] |
** Category: [[annotation]] | ** Category: [[annotation]] | ||
| − | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: | + | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a |
== Pathway(s) == | == Pathway(s) == | ||
| + | * [[P184-PWY]], protocatechuate degradation I (meta-cleavage pathway): | ||
| + | ** '''2''' reactions found over '''8''' reactions in the full pathway | ||
| + | * [[GALLATE-DEGRADATION-II-PWY]], gallate degradation I: | ||
| + | ** '''1''' reactions found over '''4''' reactions in the full pathway | ||
| + | * [[METHYLGALLATE-DEGRADATION-PWY]], methylgallate degradation: | ||
| + | ** '''2''' reactions found over '''6''' reactions in the full pathway | ||
| + | * [[GALLATE-DEGRADATION-I-PWY]], gallate degradation II: | ||
| + | ** '''1''' reactions found over '''5''' reactions in the full pathway | ||
== Reconstruction information == | == Reconstruction information == | ||
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | * category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
== External links == | == External links == | ||
| + | * METANETX-RXN : MNXR106486 | ||
| + | * RHEA: | ||
| + | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=28938 28938] | ||
* LIGAND-RXN: | * LIGAND-RXN: | ||
| − | ** [http://www.genome.jp/dbget-bin/www_bget? | + | ** [http://www.genome.jp/dbget-bin/www_bget?R00350 R00350] |
| − | {{#set: direction= | + | {{#set: direction=reversible}} |
| − | {{#set: common-name= | + | {{#set: common-name=4-hydroxy-4-methyl-2-oxoglutarate aldolase}} |
| − | {{#set: ec-number=ec- | + | {{#set: ec-number=ec-4.1.3.17}} |
{{#set: nb gene associated=1}} | {{#set: nb gene associated=1}} | ||
| − | {{#set: nb pathway associated= | + | {{#set: nb pathway associated=4}} |
{{#set: reconstruction category=annotation}} | {{#set: reconstruction category=annotation}} | ||
{{#set: reconstruction tool=pathwaytools}} | {{#set: reconstruction tool=pathwaytools}} | ||
{{#set: reconstruction comment=n.a}} | {{#set: reconstruction comment=n.a}} | ||
{{#set: reconstruction source=saccharina_japonica_genome}} | {{#set: reconstruction source=saccharina_japonica_genome}} | ||
Revision as of 08:35, 15 March 2021
Contents
Reaction RXN-2464
- direction:
- reversible
- common-name:
- 4-hydroxy-4-methyl-2-oxoglutarate aldolase
- ec-number:
Reaction formula
- 1 4-OH-4-ACETYL-2-OXOGLUTARATE[c] <=> 1 OXALACETIC_ACID[c] + 1 PYRUVATE[c]
Gene(s) associated with this reaction
- Gene: SJ13180
- Category: annotation
- Source: saccharina_japonica_genome, Tool: pathwaytools, Assignment: go-term, Comment: n.a
- Category: annotation
Pathway(s)
- P184-PWY, protocatechuate degradation I (meta-cleavage pathway):
- 2 reactions found over 8 reactions in the full pathway
- GALLATE-DEGRADATION-II-PWY, gallate degradation I:
- 1 reactions found over 4 reactions in the full pathway
- METHYLGALLATE-DEGRADATION-PWY, methylgallate degradation:
- 2 reactions found over 6 reactions in the full pathway
- GALLATE-DEGRADATION-I-PWY, gallate degradation II:
- 1 reactions found over 5 reactions in the full pathway
Reconstruction information
- category: annotation; source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
External links
