Difference between revisions of "RXN-21829"

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(Created page with "Category:reaction == Reaction SPERMINE-SYNTHASE-RXN == * direction: ** left-to-right * ec-number: ** [http://enzyme.expasy.org/EC/2.5.1.22 ec-2.5.1.22] == Reaction formula...")
(Created page with "Category:reaction == Reaction RXN0-6377 == * direction: ** left-to-right * common-name: ** nitrite reductase [nad(p)h] * ec-number: ** [http://enzyme.expasy.org/EC/1.7.1.4...")
Line 1: Line 1:
 
[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction SPERMINE-SYNTHASE-RXN ==
+
== Reaction RXN0-6377 ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 +
* common-name:
 +
** nitrite reductase [nad(p)h]
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/2.5.1.22 ec-2.5.1.22]
+
** [http://enzyme.expasy.org/EC/1.7.1.4 ec-1.7.1.4]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[S-ADENOSYLMETHIONINAMINE]][c] '''+''' 1 [[SPERMIDINE]][c] '''=>''' 1 [[5-METHYLTHIOADENOSINE]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[SPERMINE]][c]
+
* 3 [[NADH-P-OR-NOP]][c] '''+''' 1 [[NITRITE]][c] '''+''' 5 [[PROTON]][c] '''=>''' 1 [[AMMONIUM]][c] '''+''' 3 [[NAD-P-OR-NOP]][c] '''+''' 2 [[WATER]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ19088]]
+
* Gene: [[SJ21568]]
−
** Category: [[orthology]]
+
** Category: [[annotation]]
−
*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
+
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
+
* Gene: [[SJ11978]]
−
* Gene: [[SJ05219]]
+
** Category: [[annotation]]
−
** Category: [[orthology]]
+
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[ARGSPECAT-PWY]], spermine biosynthesis:
+
* [[PWY-723]], alkylnitronates degradation:
 
** '''2''' reactions found over '''2''' reactions in the full pathway
 
** '''2''' reactions found over '''2''' reactions in the full pathway
−
* [[POLYAMINSYN3-PWY]], superpathway of polyamine biosynthesis II:
+
* [[PWY-5675]], nitrate reduction V (assimilatory):
−
** '''4''' reactions found over '''1''' reactions in the full pathway
+
** '''4''' reactions found over '''4''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[orthology]]; source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
+
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
−
* RHEA:
 
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=19974 19974]
 
−
* LIGAND-RXN:
 
−
** [http://www.genome.jp/dbget-bin/www_bget?R02869 R02869]
 
−
* UNIPROT:
 
−
** [http://www.uniprot.org/uniprot/P52788 P52788]
 
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: ec-number=ec-2.5.1.22}}
+
{{#set: common-name=nitrite reductase [nad(p)h]}}
 +
{{#set: ec-number=ec-1.7.1.4}}
 
{{#set: nb gene associated=2}}
 
{{#set: nb gene associated=2}}
 
{{#set: nb pathway associated=2}}
 
{{#set: nb pathway associated=2}}
−
{{#set: reconstruction category=orthology}}
+
{{#set: reconstruction category=annotation}}
−
{{#set: reconstruction tool=pantograph}}
+
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=output_pantograph_nannochloropsis_salina|output_pantograph_ectocarpus_siliculosus}}
+
{{#set: reconstruction source=saccharina_japonica_genome}}

Revision as of 11:23, 15 January 2021

Reaction RXN0-6377

  • direction:
    • left-to-right
  • common-name:
    • nitrite reductase [nad(p)h]
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-723, alkylnitronates degradation:
    • 2 reactions found over 2 reactions in the full pathway
  • PWY-5675, nitrate reduction V (assimilatory):
    • 4 reactions found over 4 reactions in the full pathway

Reconstruction information

External links

Property "Common-name" (as page type) with input value "nitrite reductase [nad(p)h" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.




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