Difference between revisions of "RXN-21833"

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(Created page with "Category:reaction == Reaction RXN-14026 == * direction: ** left-to-right * common-name: ** cmp phosphatase ** 5'-nucleotidase * ec-number: ** [http://enzyme.expasy.org/EC/...")
(Created page with "Category:reaction == Reaction RXN-21833 == * direction: ** left-to-right == Reaction formula == * 1.0 CPD-12860[c] '''=>''' 1.0 CPD-23713[c] == Gene(s) associated...")
 
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[[Category:reaction]]
 
[[Category:reaction]]
== Reaction RXN-14026 ==
+
== Reaction RXN-21833 ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
* common-name:
 
** cmp phosphatase
 
** 5'-nucleotidase
 
* ec-number:
 
** [http://enzyme.expasy.org/EC/3.1.3.91 ec-3.1.3.91]
 
** [http://enzyme.expasy.org/EC/3.1.3.5 ec-3.1.3.5]
 
 
== Reaction formula ==
 
== Reaction formula ==
* 1 [[CMP]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[CYTIDINE]][c] '''+''' 1 [[Pi]][c]
+
* 1.0 [[CPD-12860]][c] '''=>''' 1.0 [[CPD-23713]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 
* Gene: [[SJ18895]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
* Gene: [[SJ15366]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
** Category: [[orthology]]
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
* Gene: [[SJ18402]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
** Category: [[orthology]]
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
* Gene: [[SJ16098]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
** Category: [[orthology]]
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
* Gene: [[SJ09030]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
</div>
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
* [[PWY-7185]], UTP and CTP dephosphorylation I:
+
* [[PWY-8191]], cholesterol biosynthesis (algae, late side-chain reductase):
** '''5''' reactions found over '''7''' reactions in the full pathway
+
** '''11''' reactions found over '''19''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
+
* category: [[manual]]; source: [[reaction_creator_sjap]]; tool: [[curation]]; comment: curation sterols (girard et al.)
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
* LIGAND-RXN:
 
** [http://www.genome.jp/dbget-bin/www_bget?R00511 R00511]
 
* RHEA:
 
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=29368 29368]
 
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
{{#set: common-name=5'-nucleotidase|cmp phosphatase}}
+
{{#set: nb gene associated=0}}
{{#set: ec-number=ec-3.1.3.91|ec-3.1.3.5}}
 
{{#set: nb gene associated=5}}
 
 
{{#set: nb pathway associated=1}}
 
{{#set: nb pathway associated=1}}
{{#set: reconstruction category=annotation|orthology}}
+
{{#set: reconstruction category=manual}}
{{#set: reconstruction tool=pathwaytools|pantograph}}
+
{{#set: reconstruction tool=curation}}
{{#set: reconstruction comment=n.a}}
+
{{#set: reconstruction comment=curation sterols (girard et al.)}}
{{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}
+
{{#set: reconstruction source=reaction_creator_sjap}}

Latest revision as of 11:23, 18 March 2021

Reaction RXN-21833

  • direction:
    • left-to-right

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-8191, cholesterol biosynthesis (algae, late side-chain reductase):
    • 11 reactions found over 19 reactions in the full pathway

Reconstruction information

External links