Difference between revisions of "RXN-22198"

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(Created page with "Category:reaction == Reaction PEPTIDE-ASPARTATE-BETA-DIOXYGENASE-RXN == * direction: ** left-to-right * ec-number: ** [http://enzyme.expasy.org/EC/1.14.11.16 ec-1.14.11.16...")
(Created page with "Category:reaction == Reaction RXN-22198 == * direction: ** left-to-right == Reaction formula == * 1.0 CPD-24185[c] '''=>''' 1.0 CPD-22095[c] == Gene(s) associated...")
 
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction PEPTIDE-ASPARTATE-BETA-DIOXYGENASE-RXN ==
+
== Reaction RXN-22198 ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
−
* ec-number:
 
−
** [http://enzyme.expasy.org/EC/1.14.11.16 ec-1.14.11.16]
 
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[2-KETOGLUTARATE]][c] '''+''' 1 [[OXYGEN-MOLECULE]][c] '''+''' 1 [[Protein-L-Aspartates]][c] '''=>''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[Peptide-3-hydroxy-L-Aspartates]][c] '''+''' 1 [[SUC]][c]
+
* 1.0 [[CPD-24185]][c] '''=>''' 1.0 [[CPD-22095]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ07629]]
+
* Gene: [[SJ02661]]
−
** Category: [[orthology]]
+
** Category: [[manual]]
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
+
*** Source: [[reactions_creator_sjap]], Tool: [[unknown-tool]], Assignment: n.a, Comment: gallo2020
−
* Gene: [[SJ12047]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
* Gene: [[SJ09376]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
* Gene: [[SJ19825]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
* Gene: [[SJ10867]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
 +
* [[PWY-8238]]:
 +
** '''2''' reactions found over '''n.a''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
+
* category: [[manual]]; source: [[reactions_creator_sjap]]; tool: [[curation]]; comment: gallo2020
−
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
−
* RHEA:
 
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=11508 11508]
 
−
* LIGAND-RXN:
 
−
** [http://www.genome.jp/dbget-bin/www_bget?R04073 R04073]
 
−
* UNIPROT:
 
−
** [http://www.uniprot.org/uniprot/Q28056 Q28056]
 
−
** [http://www.uniprot.org/uniprot/Q93178 Q93178]
 
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: ec-number=ec-1.14.11.16}}
+
{{#set: nb gene associated=1}}
−
{{#set: nb gene associated=5}}
+
{{#set: nb pathway associated=1}}
−
{{#set: nb pathway associated=0}}
+
{{#set: reconstruction category=manual}}
−
{{#set: reconstruction category=annotation|orthology}}
+
{{#set: reconstruction tool=curation}}
−
{{#set: reconstruction tool=pantograph|pathwaytools}}
+
{{#set: reconstruction comment=gallo2020}}
−
{{#set: reconstruction comment=n.a}}
+
{{#set: reconstruction source=reactions_creator_sjap}}
−
{{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}
 

Latest revision as of 11:19, 18 March 2021

Reaction RXN-22198

  • direction:
    • left-to-right

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-8238:
    • 2 reactions found over n.a reactions in the full pathway

Reconstruction information

External links

Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=RXN-22198&oldid=140392"