Difference between revisions of "RXN-2425"

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(Created page with "Category:pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-6853 PWY-6853] == * taxonomic-range: ** [http://metacyc.org/META/NEW-IMAGE?object=tax-2 tax-2] **...")
(Created page with "Category:reaction == Reaction RXN-2425 == * direction: ** reversible * common-name: ** 2,3-dehydroadipyl-coa hydratase ** enoyl-coa hydratase * ec-number: ** [http://enzym...")
 
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[[Category:pathway]]
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[[Category:reaction]]
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-6853 PWY-6853] ==
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== Reaction RXN-2425 ==
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* taxonomic-range:
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* direction:
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** [http://metacyc.org/META/NEW-IMAGE?object=tax-2 tax-2]
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** reversible
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** [http://metacyc.org/META/NEW-IMAGE?object=tax-4751 tax-4751]
 
 
* common-name:
 
* common-name:
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** ethylene biosynthesis ii (microbes)
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** 2,3-dehydroadipyl-coa hydratase
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== Reaction(s) found ==
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** enoyl-coa hydratase
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* [[RXN-14116]]
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* ec-number:
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== Reaction(s) not found ==
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** [http://enzyme.expasy.org/EC/4.2.1.17 ec-4.2.1.17]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-14542 RXN-14542]
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== Reaction formula ==
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* [http://metacyc.org/META/NEW-IMAGE?object=SPONTPRO-RXN SPONTPRO-RXN]
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* 1 [[3-HYDROXYADIPYL-COA]][c] '''<=>''' 1 [[TRANS-23-DEHYDROADIPYL-COA]][c] '''+''' 1 [[WATER]][c]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-12538 RXN-12538]
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== Gene(s) associated with this reaction  ==
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-12536 RXN-12536]
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<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
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{{#set: taxonomic-range=tax-4751|tax-2}}
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* Gene: [[SJ21390]]
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{{#set: common-name=ethylene biosynthesis ii (microbes)}}
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** Category: [[annotation]]
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{{#set: nb reaction found=1}}
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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{{#set: completion rate=0.2}}
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** Category: [[orthology]]
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{{#set: nb total reaction=5}}
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*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
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* Gene: [[SJ10275]]
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** Category: [[orthology]]
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*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
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* Gene: [[SJ03913]]
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** Category: [[annotation]]
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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** Category: [[orthology]]
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*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
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*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
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* Gene: [[SJ14591]]
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** Category: [[annotation]]
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
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* Gene: [[SJ07211]]
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** Category: [[annotation]]
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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** Category: [[orthology]]
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*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
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*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
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* Gene: [[SJ03584]]
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** Category: [[annotation]]
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
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</div>
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== Pathway(s)  ==
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* [[PWY0-321]], phenylacetate degradation I (aerobic):
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** '''2''' reactions found over '''9''' reactions in the full pathway
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* [[PWY-1361]], benzoyl-CoA degradation I (aerobic):
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** '''2''' reactions found over '''7''' reactions in the full pathway
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== Reconstruction information  ==
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* category: [[orthology]]; source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
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* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
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== External links  ==
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* METANETX-RXN : MNXR143598
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* RHEA:
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=34863 34863]
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* LIGAND-RXN:
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** [http://www.genome.jp/dbget-bin/www_bget?R06942 R06942]
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{{#set: direction=reversible}}
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{{#set: common-name=2,3-dehydroadipyl-coa hydratase|enoyl-coa hydratase}}
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{{#set: ec-number=ec-4.2.1.17}}
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{{#set: nb gene associated=6}}
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{{#set: nb pathway associated=2}}
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{{#set: reconstruction category=orthology|annotation}}
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{{#set: reconstruction tool=pathwaytools|pantograph}}
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{{#set: reconstruction comment=n.a}}
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{{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus|output_pantograph_arabidopsis_thaliana|saccharina_japonica_genome}}

Latest revision as of 11:23, 18 March 2021

Reaction RXN-2425

  • direction:
    • reversible
  • common-name:
    • 2,3-dehydroadipyl-coa hydratase
    • enoyl-coa hydratase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY0-321, phenylacetate degradation I (aerobic):
    • 2 reactions found over 9 reactions in the full pathway
  • PWY-1361, benzoyl-CoA degradation I (aerobic):
    • 2 reactions found over 7 reactions in the full pathway

Reconstruction information

External links

  • METANETX-RXN : MNXR143598
  • RHEA:
  • LIGAND-RXN:





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