Difference between revisions of "RXN-2464"

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(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=SEDOBISALDOL-RXN SEDOBISALDOL-RXN] == * direction: ** reversible * ec-number: ** [http://enzyme.exp...")
(Created page with "Category:reaction == Reaction RXN-2464 == * direction: ** reversible * common-name: ** 4-hydroxy-4-methyl-2-oxoglutarate aldolase * ec-number: ** [http://enzyme.expasy.org...")
 
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[[Category:reaction]]
 
[[Category:reaction]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=SEDOBISALDOL-RXN SEDOBISALDOL-RXN] ==
+
== Reaction RXN-2464 ==
 
* direction:
 
* direction:
 
** reversible
 
** reversible
 +
* common-name:
 +
** 4-hydroxy-4-methyl-2-oxoglutarate aldolase
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/4.1.2 ec-4.1.2]
+
** [http://enzyme.expasy.org/EC/4.1.3.17 ec-4.1.3.17]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[DIHYDROXY-ACETONE-PHOSPHATE]][c] '''+''' 1 [[ERYTHROSE-4P]][c] '''<=>''' 1 [[D-SEDOHEPTULOSE-1-7-P2]][c]
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* 1 [[4-OH-4-ACETYL-2-OXOGLUTARATE]][c] '''<=>''' 1 [[OXALACETIC_ACID]][c] '''+''' 1 [[PYRUVATE]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ12479]]
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* Gene: [[SJ13180]]
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** Category: [[orthology]]
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** Category: [[annotation]]
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*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
−
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY0-1517]], sedoheptulose bisphosphate bypass: [http://metacyc.org/META/NEW-IMAGE?object=PWY0-1517 PWY0-1517]
+
* [[P184-PWY]], protocatechuate degradation I (meta-cleavage pathway):
−
** '''1''' reactions found over '''2''' reactions in the full pathway
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** '''2''' reactions found over '''8''' reactions in the full pathway
−
* [[CALVIN-PWY]], Calvin-Benson-Bassham cycle: [http://metacyc.org/META/NEW-IMAGE?object=CALVIN-PWY CALVIN-PWY]
+
* [[GALLATE-DEGRADATION-II-PWY]], gallate degradation I:
−
** '''12''' reactions found over '''13''' reactions in the full pathway
+
** '''1''' reactions found over '''4''' reactions in the full pathway
 +
* [[METHYLGALLATE-DEGRADATION-PWY]], methylgallate degradation:
 +
** '''2''' reactions found over '''6''' reactions in the full pathway
 +
* [[GALLATE-DEGRADATION-I-PWY]], gallate degradation II:
 +
** '''1''' reactions found over '''5''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[orthology]]; source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
+
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
 +
* METANETX-RXN : MNXR106486
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=30170 30170]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=28938 28938]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R01829 R01829]
+
** [http://www.genome.jp/dbget-bin/www_bget?R00350 R00350]
 
{{#set: direction=reversible}}
 
{{#set: direction=reversible}}
−
{{#set: ec-number=ec-4.1.2}}
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{{#set: common-name=4-hydroxy-4-methyl-2-oxoglutarate aldolase}}
 +
{{#set: ec-number=ec-4.1.3.17}}
 
{{#set: nb gene associated=1}}
 
{{#set: nb gene associated=1}}
−
{{#set: nb pathway associated=2}}
+
{{#set: nb pathway associated=4}}
−
{{#set: reconstruction category=orthology}}
+
{{#set: reconstruction category=annotation}}
−
{{#set: reconstruction tool=pantograph}}
+
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus|output_pantograph_arabidopsis_thaliana}}
+
{{#set: reconstruction source=saccharina_japonica_genome}}

Latest revision as of 11:20, 18 March 2021

Reaction RXN-2464

  • direction:
    • reversible
  • common-name:
    • 4-hydroxy-4-methyl-2-oxoglutarate aldolase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • P184-PWY, protocatechuate degradation I (meta-cleavage pathway):
    • 2 reactions found over 8 reactions in the full pathway
  • GALLATE-DEGRADATION-II-PWY, gallate degradation I:
    • 1 reactions found over 4 reactions in the full pathway
  • METHYLGALLATE-DEGRADATION-PWY, methylgallate degradation:
    • 2 reactions found over 6 reactions in the full pathway
  • GALLATE-DEGRADATION-I-PWY, gallate degradation II:
    • 1 reactions found over 5 reactions in the full pathway

Reconstruction information

External links

  • METANETX-RXN : MNXR106486
  • RHEA:
  • LIGAND-RXN:





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