Difference between revisions of "RXN-2762"

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(Created page with "Category:pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY3O-4106 PWY3O-4106] == * taxonomic-range: ** [http://metacyc.org/META/NEW-IMAGE?object=tax-33208 t...")
(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=ARGSUCCINLYA-RXN ARGSUCCINLYA-RXN] == * direction: ** reversible * common-name: ** argininosuccinat...")
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[[Category:pathway]]
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[[Category:reaction]]
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY3O-4106 PWY3O-4106] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=ARGSUCCINLYA-RXN ARGSUCCINLYA-RXN] ==
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* taxonomic-range:
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* direction:
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** [http://metacyc.org/META/NEW-IMAGE?object=tax-33208 tax-33208]
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** reversible
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** [http://metacyc.org/META/NEW-IMAGE?object=tax-4751 tax-4751]
 
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** [http://metacyc.org/META/NEW-IMAGE?object=tax-2 tax-2]
 
 
* common-name:
 
* common-name:
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** nad salvage pathway iv
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** argininosuccinate lyase
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== Reaction(s) found ==
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* ec-number:
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* [[2.7.7.1-RXN]]
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** [http://enzyme.expasy.org/EC/4.3.2.1 ec-4.3.2.1]
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== Reaction(s) not found ==
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== Reaction formula ==
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* [http://metacyc.org/META/NEW-IMAGE?object=RIBOSYLNICOTINAMIDE-KINASE-RXN RIBOSYLNICOTINAMIDE-KINASE-RXN]
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* 1 [[L-ARGININO-SUCCINATE]][c] '''<=>''' 1 [[ARG]][c] '''+''' 1 [[FUM]][c]
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{{#set: taxonomic-range=tax-4751|tax-2|tax-33208}}
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== Gene(s) associated with this reaction  ==
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{{#set: common-name=nad salvage pathway iv}}
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* Gene: [[SJ20639]]
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{{#set: nb reaction found=1}}
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** Category: [[annotation]]
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{{#set: completion rate=0.5}}
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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{{#set: nb total reaction=2}}
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** Category: [[orthology]]
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*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
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*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
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*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
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== Pathway(s) ==
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* [[ARGSYN-PWY]], L-arginine biosynthesis I (via L-ornithine): [http://metacyc.org/META/NEW-IMAGE?object=ARGSYN-PWY ARGSYN-PWY]
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** '''5''' reactions found over '''4''' reactions in the full pathway
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* [[PWY-4983]], nitric oxide biosynthesis II (mammals): [http://metacyc.org/META/NEW-IMAGE?object=PWY-4983 PWY-4983]
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** '''3''' reactions found over '''3''' reactions in the full pathway
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* [[PWY-7400]], L-arginine biosynthesis IV (archaebacteria): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7400 PWY-7400]
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** '''7''' reactions found over '''9''' reactions in the full pathway
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* [[PWY-4984]], urea cycle: [http://metacyc.org/META/NEW-IMAGE?object=PWY-4984 PWY-4984]
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** '''5''' reactions found over '''5''' reactions in the full pathway
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* [[ARGSYNBSUB-PWY]], L-arginine biosynthesis II (acetyl cycle): [http://metacyc.org/META/NEW-IMAGE?object=ARGSYNBSUB-PWY ARGSYNBSUB-PWY]
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** '''9''' reactions found over '''9''' reactions in the full pathway
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* [[PWY-5154]], L-arginine biosynthesis III (via N-acetyl-L-citrulline): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5154 PWY-5154]
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** '''8''' reactions found over '''9''' reactions in the full pathway
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== Reconstruction information  ==
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* category: [[orthology]]; source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
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* category: [[orthology]]; source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
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* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
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== External links  ==
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<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
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* RHEA:
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=24023 24023]
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* LIGAND-RXN:
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** [http://www.genome.jp/dbget-bin/www_bget?R01086 R01086]
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* UNIPROT:
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** [http://www.uniprot.org/uniprot/P50987 P50987]
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** [http://www.uniprot.org/uniprot/Q46104 Q46104]
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** [http://www.uniprot.org/uniprot/P11447 P11447]
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** [http://www.uniprot.org/uniprot/Q9JVG7 Q9JVG7]
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** [http://www.uniprot.org/uniprot/Q9CJ76 Q9CJ76]
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** [http://www.uniprot.org/uniprot/P44314 P44314]
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** [http://www.uniprot.org/uniprot/Q58201 Q58201]
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** [http://www.uniprot.org/uniprot/P33110 P33110]
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** [http://www.uniprot.org/uniprot/Q01592 Q01592]
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** [http://www.uniprot.org/uniprot/P40369 P40369]
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** [http://www.uniprot.org/uniprot/P50988 P50988]
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** [http://www.uniprot.org/uniprot/P73257 P73257]
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** [http://www.uniprot.org/uniprot/P50514 P50514]
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** [http://www.uniprot.org/uniprot/P04076 P04076]
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** [http://www.uniprot.org/uniprot/P04424 P04424]
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** [http://www.uniprot.org/uniprot/P20673 P20673]
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</div>
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{{#set: direction=reversible}}
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{{#set: common-name=argininosuccinate lyase}}
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{{#set: ec-number=ec-4.3.2.1}}
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{{#set: nb gene associated=1}}
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{{#set: nb pathway associated=6}}
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{{#set: reconstruction category=annotation|orthology}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}
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{{#set: reconstruction comment=n.a}}
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{{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus|output_pantograph_arabidopsis_thaliana|saccharina_japonica_genome|output_pantograph_nannochloropsis_salina}}

Revision as of 09:33, 27 August 2019

Reaction ARGSUCCINLYA-RXN

  • direction:
    • reversible
  • common-name:
    • argininosuccinate lyase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • ARGSYN-PWY, L-arginine biosynthesis I (via L-ornithine): ARGSYN-PWY
    • 5 reactions found over 4 reactions in the full pathway
  • PWY-4983, nitric oxide biosynthesis II (mammals): PWY-4983
    • 3 reactions found over 3 reactions in the full pathway
  • PWY-7400, L-arginine biosynthesis IV (archaebacteria): PWY-7400
    • 7 reactions found over 9 reactions in the full pathway
  • PWY-4984, urea cycle: PWY-4984
    • 5 reactions found over 5 reactions in the full pathway
  • ARGSYNBSUB-PWY, L-arginine biosynthesis II (acetyl cycle): ARGSYNBSUB-PWY
    • 9 reactions found over 9 reactions in the full pathway
  • PWY-5154, L-arginine biosynthesis III (via N-acetyl-L-citrulline): PWY-5154
    • 8 reactions found over 9 reactions in the full pathway

Reconstruction information

External links





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